RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeastyeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP1YGR178C SGS1P35187 1447 aa15.62■□□□□ 0.09
PBP1YGR178C SPA2P23201 1466 aaKnown RBP15.56■□□□□ 0.08
PBP1YGR178C SSN2P38931 1420 aa15.36■□□□□ 0.05
PBP1YGR178C MON2P48563 1636 aaPredicted RBP15.24■□□□□ 0.03
PBP1YGR178C INO80P53115 1489 aa15.22■□□□□ 0.03
PBP1YGR178C DRS1P32892 752 aaKnown RBP14.96□□□□□ -0.01
PBP1YGR178C TCB3Q03640 1545 aaKnown RBP14.86□□□□□ -0.03
PBP1YGR178C TY1B-DR4Q07793 1604 aa14.78□□□□□ -0.04
PBP1YGR178C SKI3P17883 1432 aaKnown RBP14.72□□□□□ -0.05
PBP1YGR178C SWR1Q05471 1514 aa14.71□□□□□ -0.05
PBP1YGR178C DNA2P38859 1522 aa14.53□□□□□ -0.08
PBP1YGR178C NOP2P40991 618 aaKnown RBP14.42□□□□□ -0.1
PBP1YGR178C HSL1P34244 1518 aa14.37□□□□□ -0.11
PBP1YGR178C KOG1P38873 1557 aa14.35□□□□□ -0.11
PBP1YGR178C SPT6P23615 1451 aaKnown RBP14.34□□□□□ -0.11
PBP1YGR178C NSR1P27476 414 aaKnown RBP RIP-Chip data14.3□□□□□ -0.12not detected
PBP1YGR178C MMS22Q06164 1454 aa14.23□□□□□ -0.13
PBP1YGR178C CHD1P32657 1468 aa14.16□□□□□ -0.14
PBP1YGR178C HIR3P47171 1648 aa14.08□□□□□ -0.15
PBP1YGR178C XRN1P22147 1528 aaKnown RBP14.05□□□□□ -0.16
PBP1YGR178C RSE1Q04693 1361 aaKnown RBP14.05□□□□□ -0.16
PBP1YGR178C BFR2Q06631 534 aaKnown RBP14.02□□□□□ -0.16
PBP1YGR178C UFD4P33202 1483 aa13.92□□□□□ -0.18
PBP1YGR178C REV3P14284 1504 aa13.87□□□□□ -0.19
PBP1YGR178C THO2P53552 1597 aaKnown RBP13.87□□□□□ -0.19
PBP1YGR178C ECM5Q03214 1411 aa13.86□□□□□ -0.19
PBP1YGR178C SAS10Q12136 610 aaPredicted RBP13.83□□□□□ -0.19
PBP1YGR178C TAF2P23255 1407 aa13.81□□□□□ -0.2
PBP1YGR178C TRM732Q03496 1420 aa13.8□□□□□ -0.2
PBP1YGR178C BUD4P47136 1447 aa13.79□□□□□ -0.2
PBP1YGR178C SSK2P53599 1579 aa13.78□□□□□ -0.2
PBP1YGR178C SIN3P22579 1536 aa13.76□□□□□ -0.21
PBP1YGR178C STU1P38198 1513 aa13.73□□□□□ -0.21
PBP1YGR178C MYO2P19524 1574 aaKnown RBP13.72□□□□□ -0.21
PBP1YGR178C IKI3Q06706 1349 aaKnown RBP13.72□□□□□ -0.21
PBP1YGR178C ENP1P38333 483 aaKnown RBP13.65□□□□□ -0.22
PBP1YGR178C SPP41P38904 1435 aa13.65□□□□□ -0.22
PBP1YGR178C YTA7P40340 1379 aa13.65□□□□□ -0.22
PBP1YGR178C ESP1Q03018 1630 aa13.64□□□□□ -0.23
PBP1YGR178C BPT1P14772 1559 aa13.63□□□□□ -0.23
PBP1YGR178C POL1P13382 1468 aa13.62□□□□□ -0.23
PBP1YGR178C MDS3P53094 1487 aa13.61□□□□□ -0.23
PBP1YGR178C SCC2Q04002 1493 aa13.56□□□□□ -0.24
PBP1YGR178C PEP1P32319 1579 aa13.55□□□□□ -0.24
PBP1YGR178C POL5P39985 1022 aaKnown RBP13.55□□□□□ -0.24
PBP1YGR178C SSM4P40318 1319 aa13.54□□□□□ -0.24
PBP1YGR178C ATG2P53855 1592 aa13.54□□□□□ -0.24
PBP1YGR178C SPT7P35177 1332 aa13.45□□□□□ -0.26
PBP1YGR178C NUP170P38181 1502 aa13.44□□□□□ -0.26
PBP1YGR178C STH1P32597 1359 aa13.41□□□□□ -0.26
PBP1YGR178C RTT106P40161 455 aa13.37□□□□□ -0.27
PBP1YGR178C MYO4P32492 1471 aa13.36□□□□□ -0.27
PBP1YGR178C RKR1Q04781 1562 aa13.36□□□□□ -0.27
PBP1YGR178C YOR1P53049 1477 aa13.34□□□□□ -0.27
PBP1YGR178C YPK9Q12697 1472 aa13.34□□□□□ -0.27
PBP1YGR178C TAF7Q05021 590 aa13.33□□□□□ -0.28
PBP1YGR178C SEC3P33332 1336 aaKnown RBP13.32□□□□□ -0.28
PBP1YGR178C CAB3P36076 571 aa13.31□□□□□ -0.28
PBP1YGR178C SNQ2P32568 1501 aaKnown RBP13.29□□□□□ -0.28
PBP1YGR178C PAN1P32521 1480 aa13.29□□□□□ -0.28
PBP1YGR178C IFH1P39520 1085 aa13.27□□□□□ -0.29
PBP1YGR178C SMC4Q12267 1418 aa13.26□□□□□ -0.29
PBP1YGR178C PRS1P32895 427 aaKnown RBP13.26□□□□□ -0.29
PBP1YGR178C MTC1P47018 478 aaKnown RBP13.25□□□□□ -0.29
PBP1YGR178C EBP2P36049 427 aaKnown RBP13.24□□□□□ -0.29
PBP1YGR178C MLP2P40457 1679 aa13.24□□□□□ -0.29
PBP1YGR178C PDR10P51533 1564 aa13.24□□□□□ -0.29
PBP1YGR178C YPR148CQ06523 435 aa13.23□□□□□ -0.29
PBP1YGR178C GEA1P47102 1408 aaPredicted RBP13.19□□□□□ -0.3
PBP1YGR178C TSC11P40061 1430 aa13.18□□□□□ -0.3
PBP1YGR178C PDR15Q04182 1529 aaKnown RBP13.17□□□□□ -0.3
PBP1YGR178C LEU3P08638 886 aa13.17□□□□□ -0.3
PBP1YGR178C YCF1P39109 1515 aaKnown RBP13.16□□□□□ -0.3
PBP1YGR178C TOP2P06786 1428 aaKnown RBP13.09□□□□□ -0.31
PBP1YGR178C RPO31P04051 1460 aa13.06□□□□□ -0.32
PBP1YGR178C ULS1Q08562 1619 aa13.03□□□□□ -0.32
PBP1YGR178C TY1B-DR3Q99231 1755 aa13.02□□□□□ -0.33
PBP1YGR178C TFA1P36100 482 aa13.01□□□□□ -0.33
PBP1YGR178C PSD2P53037 1138 aaKnown RBP13.01□□□□□ -0.33
PBP1YGR178C CFT1Q06632 1357 aaKnown RBP12.99□□□□□ -0.33
PBP1YGR178C TY3B-GQ99315 1547 aa12.98□□□□□ -0.33
PBP1YGR178C SRB8P25648 1427 aa12.98□□□□□ -0.33
PBP1YGR178C TY2B-LR1P0C2J3 1770 aa12.97□□□□□ -0.33
PBP1YGR178C TY2B-FP0CX63 1770 aa12.97□□□□□ -0.33
PBP1YGR178C TY2B-GR2P0CX64 1770 aa12.97□□□□□ -0.33
PBP1YGR178C TY2B-CP25384 1770 aa12.97□□□□□ -0.33
PBP1YGR178C TY2B-DR2Q03494 1770 aa12.97□□□□□ -0.33
PBP1YGR178C TY1B-DR1Q03855 1755 aa12.97□□□□□ -0.33
PBP1YGR178C TY2B-DR3Q07791 1770 aaKnown RBP12.97□□□□□ -0.33
PBP1YGR178C TY2B-OR1Q12113 1770 aa12.97□□□□□ -0.33
PBP1YGR178C TY2B-DR1Q12472 1770 aa12.97□□□□□ -0.33
PBP1YGR178C TY2B-OR2Q12501 1770 aa12.97□□□□□ -0.33
PBP1YGR178C VPS15P22219 1454 aa12.95□□□□□ -0.34
PBP1YGR178C YLR419WQ06698 1435 aaKnown RBP12.92□□□□□ -0.34
PBP1YGR178C DNF1P32660 1571 aa12.91□□□□□ -0.34
PBP1YGR178C TY2B-BQ12491 1770 aa12.9□□□□□ -0.34
PBP1YGR178C IME2P32581 645 aa12.88□□□□□ -0.35
PBP1YGR178C NUP159P40477 1460 aa12.87□□□□□ -0.35
PBP1YGR178C ORC1P54784 914 aaPredicted RBP12.86□□□□□ -0.35
PBP1YGR178C FUN12P39730 1002 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms