RNA–Protein interactions for RNA: YOR273C

TPO4, Transcript of Polyamine transporter of the major facilitator superfamily, yeastyeast

Gene TPO4, Length 1,980 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPO4YOR273C RQC2Q12532 1038 aaKnown RBP14.16□□□□□ -0.14
TPO4YOR273C BFR2Q06631 534 aaKnown RBP14.11□□□□□ -0.15
TPO4YOR273C SGS1P35187 1447 aa13.19□□□□□ -0.3
TPO4YOR273C SPA2P23201 1466 aaKnown RBP13.12□□□□□ -0.31
TPO4YOR273C NOP2P40991 618 aaKnown RBP12.97□□□□□ -0.33
TPO4YOR273C SSN2P38931 1420 aa12.95□□□□□ -0.34
TPO4YOR273C URN1Q06525 465 aaKnown RBP12.78□□□□□ -0.36
TPO4YOR273C EBP2P36049 427 aaKnown RBP12.75□□□□□ -0.37
TPO4YOR273C CAB3P36076 571 aa12.69□□□□□ -0.38
TPO4YOR273C INO80P53115 1489 aa12.64□□□□□ -0.39
TPO4YOR273C DRS1P32892 752 aaKnown RBP12.58□□□□□ -0.4
TPO4YOR273C SIS2P36024 562 aa12.52□□□□□ -0.41
TPO4YOR273C TAF7Q05021 590 aa12.41□□□□□ -0.42
TPO4YOR273C NSR1P27476 414 aaKnown RBP RIP-Chip data12.39□□□□□ -0.43not detected
TPO4YOR273C SKI3P17883 1432 aaKnown RBP12.38□□□□□ -0.43
TPO4YOR273C TCB3Q03640 1545 aaKnown RBP12.2□□□□□ -0.46
TPO4YOR273C YPR148CQ06523 435 aa12.18□□□□□ -0.46
TPO4YOR273C AVT3P36062 692 aa12.17□□□□□ -0.46
TPO4YOR273C YFR016CP43597 1233 aaKnown RBP12.1□□□□□ -0.47
TPO4YOR273C TY1B-DR4Q07793 1604 aa11.99□□□□□ -0.49
TPO4YOR273C CHD1P32657 1468 aa11.97□□□□□ -0.49
TPO4YOR273C MMS22Q06164 1454 aa11.96□□□□□ -0.5
TPO4YOR273C HSL1P34244 1518 aa11.94□□□□□ -0.5
TPO4YOR273C SPT6P23615 1451 aaKnown RBP11.88□□□□□ -0.51
TPO4YOR273C RPS0BP46654 252 aaKnown RBP11.86□□□□□ -0.51
TPO4YOR273C XRN1P22147 1528 aaKnown RBP11.84□□□□□ -0.51
TPO4YOR273C HIR3P47171 1648 aa11.79□□□□□ -0.52
TPO4YOR273C CWC22P53333 577 aaKnown RBP11.72□□□□□ -0.53
TPO4YOR273C RSE1Q04693 1361 aaKnown RBP11.7□□□□□ -0.54
TPO4YOR273C UFD4P33202 1483 aa11.7□□□□□ -0.54
TPO4YOR273C REV3P14284 1504 aa11.7□□□□□ -0.54
TPO4YOR273C DIP2Q12220 943 aaPredicted RBP11.68□□□□□ -0.54
TPO4YOR273C THO2P53552 1597 aaKnown RBP11.67□□□□□ -0.54
TPO4YOR273C KRI1P42846 591 aaKnown RBP11.66□□□□□ -0.54
TPO4YOR273C SIN3P22579 1536 aa11.63□□□□□ -0.55
TPO4YOR273C TCB2P48231 1178 aa11.63□□□□□ -0.55
TPO4YOR273C SSK2P53599 1579 aa11.62□□□□□ -0.55
TPO4YOR273C TRM732Q03496 1420 aa11.59□□□□□ -0.55
TPO4YOR273C TAF2P23255 1407 aa11.58□□□□□ -0.56
TPO4YOR273C STU1P38198 1513 aa11.57□□□□□ -0.56
TPO4YOR273C YRB30P53107 440 aaPredicted RBP11.56□□□□□ -0.56
TPO4YOR273C SAS10Q12136 610 aaPredicted RBP11.56□□□□□ -0.56
TPO4YOR273C IKI3Q06706 1349 aaKnown RBP11.54□□□□□ -0.56
TPO4YOR273C LEO1P38439 464 aa11.52□□□□□ -0.57
TPO4YOR273C YTA7P40340 1379 aa11.51□□□□□ -0.57
TPO4YOR273C MNN4P36044 1178 aa11.51□□□□□ -0.57
TPO4YOR273C AIM44Q99299 758 aa11.5□□□□□ -0.57
TPO4YOR273C POL1P13382 1468 aa11.5□□□□□ -0.57
TPO4YOR273C MYO2P19524 1574 aaKnown RBP11.48□□□□□ -0.57
TPO4YOR273C ESP1Q03018 1630 aa11.48□□□□□ -0.57
TPO4YOR273C SPP41P38904 1435 aa11.48□□□□□ -0.57
TPO4YOR273C ENP1P38333 483 aaKnown RBP11.47□□□□□ -0.57
TPO4YOR273C BPT1P14772 1559 aa11.45□□□□□ -0.58
TPO4YOR273C MON2P48563 1636 aaPredicted RBP11.42□□□□□ -0.58
TPO4YOR273C ENV11P53246 860 aa11.41□□□□□ -0.58
TPO4YOR273C SCC2Q04002 1493 aa11.4□□□□□ -0.58
TPO4YOR273C SWR1Q05471 1514 aa11.4□□□□□ -0.58
TPO4YOR273C DEF1P35732 738 aaKnown RBP11.38□□□□□ -0.59
TPO4YOR273C SSM4P40318 1319 aa11.37□□□□□ -0.59
TPO4YOR273C SEC3P33332 1336 aaKnown RBP11.37□□□□□ -0.59
TPO4YOR273C NUP170P38181 1502 aa11.34□□□□□ -0.59
TPO4YOR273C ECM5Q03214 1411 aa11.33□□□□□ -0.6
TPO4YOR273C NUG1P40010 520 aaKnown RBP11.33□□□□□ -0.6
TPO4YOR273C SPT7P35177 1332 aa11.32□□□□□ -0.6
TPO4YOR273C CLC1P17891 233 aa11.32□□□□□ -0.6
TPO4YOR273C POL5P39985 1022 aaKnown RBP11.32□□□□□ -0.6
TPO4YOR273C NOP53Q12080 455 aaKnown RBP11.3□□□□□ -0.6
TPO4YOR273C QCR6P00127 147 aa11.29□□□□□ -0.6
TPO4YOR273C YGR130CP53278 816 aa11.29□□□□□ -0.6
TPO4YOR273C DNA2P38859 1522 aa11.29□□□□□ -0.6
TPO4YOR273C SPT21P35209 758 aa11.28□□□□□ -0.6
TPO4YOR273C FPR3P38911 411 aaKnown RBP11.28□□□□□ -0.6
TPO4YOR273C MYO4P32492 1471 aa11.27□□□□□ -0.6
TPO4YOR273C YPK9Q12697 1472 aa11.27□□□□□ -0.6
TPO4YOR273C RLF2Q12495 606 aa11.27□□□□□ -0.61
TPO4YOR273C PSH1Q12161 406 aa11.26□□□□□ -0.61
TPO4YOR273C YOR1P53049 1477 aa11.26□□□□□ -0.61
TPO4YOR273C TFA1P36100 482 aa11.25□□□□□ -0.61
TPO4YOR273C STH1P32597 1359 aa11.25□□□□□ -0.61
TPO4YOR273C NAP1P25293 417 aaKnown RBP11.24□□□□□ -0.61
TPO4YOR273C RKR1Q04781 1562 aa11.24□□□□□ -0.61
TPO4YOR273C BUD4P47136 1447 aa11.23□□□□□ -0.61
TPO4YOR273C IME2P32581 645 aa11.21□□□□□ -0.61
TPO4YOR273C IOC4Q04213 475 aa11.21□□□□□ -0.61
TPO4YOR273C SNQ2P32568 1501 aaKnown RBP11.19□□□□□ -0.62
TPO4YOR273C FPR4Q06205 392 aaPredicted RBP11.17□□□□□ -0.62
TPO4YOR273C RNA1P11745 407 aaKnown RBP11.16□□□□□ -0.62
TPO4YOR273C ATG2P53855 1592 aa11.16□□□□□ -0.62
TPO4YOR273C RTT106P40161 455 aa11.16□□□□□ -0.62
TPO4YOR273C SMC4Q12267 1418 aa11.15□□□□□ -0.62
TPO4YOR273C SPT2P06843 333 aaPredicted RBP11.13□□□□□ -0.63
TPO4YOR273C PAN1P32521 1480 aa11.13□□□□□ -0.63
TPO4YOR273C PRS1P32895 427 aaKnown RBP11.1□□□□□ -0.63
TPO4YOR273C IFH1P39520 1085 aa11.1□□□□□ -0.63
TPO4YOR273C GEA1P47102 1408 aaPredicted RBP11.09□□□□□ -0.63
TPO4YOR273C TSC11P40061 1430 aa11.08□□□□□ -0.64
TPO4YOR273C MLP2P40457 1679 aa11.08□□□□□ -0.64
TPO4YOR273C TOP2P06786 1428 aaKnown RBP11.07□□□□□ -0.64
TPO4YOR273C RPO31P04051 1460 aa11.06□□□□□ -0.64
TPO4YOR273C RLP24Q07915 199 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms