RNA–Protein interactions for RNA: YKR008W

RSC4, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC4, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC4YKR008W DRS1P32892 752 aaKnown RBP17.77■□□□□ 0.43
RSC4YKR008W TFA1P36100 482 aa16.39■□□□□ 0.21
RSC4YKR008W BFR2Q06631 534 aaKnown RBP16.1■□□□□ 0.17
RSC4YKR008W MTC1P47018 478 aaKnown RBP16.04■□□□□ 0.16
RSC4YKR008W RQC2Q12532 1038 aaKnown RBP15.41■□□□□ 0.06
RSC4YKR008W AVT3P36062 692 aa14.93□□□□□ -0.02
RSC4YKR008W TAF7Q05021 590 aa14.82□□□□□ -0.04
RSC4YKR008W DIP2Q12220 943 aaPredicted RBP14.57□□□□□ -0.08
RSC4YKR008W DMA1P38823 416 aa14.14□□□□□ -0.15
RSC4YKR008W LEO1P38439 464 aa13.77□□□□□ -0.21
RSC4YKR008W RSE1Q04693 1361 aaKnown RBP13.24□□□□□ -0.29
RSC4YKR008W PTP3P40048 928 aa13.17□□□□□ -0.3
RSC4YKR008W LEU3P08638 886 aa13.06□□□□□ -0.32
RSC4YKR008W SAS10Q12136 610 aaPredicted RBP12.89□□□□□ -0.35
RSC4YKR008W SSP1P38871 571 aa12.74□□□□□ -0.37
RSC4YKR008W DMA2P53924 522 aa12.74□□□□□ -0.37
RSC4YKR008W RPL17AP05740 184 aaKnown RBP12.67□□□□□ -0.38
RSC4YKR008W RPL17BP46990 184 aaKnown RBP12.67□□□□□ -0.38
RSC4YKR008W ABP1P15891 592 aaKnown RBP12.66□□□□□ -0.38
RSC4YKR008W RIM101P33400 625 aa12.61□□□□□ -0.39
RSC4YKR008W URN1Q06525 465 aaKnown RBP12.57□□□□□ -0.4
RSC4YKR008W ISW2Q08773 1120 aa12.56□□□□□ -0.4
RSC4YKR008W RPN1P38764 993 aaKnown RBP12.5□□□□□ -0.41
RSC4YKR008W SPT21P35209 758 aa12.45□□□□□ -0.42
RSC4YKR008W RLF2Q12495 606 aa12.44□□□□□ -0.42
RSC4YKR008W RPG1P38249 964 aaKnown RBP12.42□□□□□ -0.42
RSC4YKR008W IFH1P39520 1085 aa12.36□□□□□ -0.43
RSC4YKR008W OXP1P28273 1286 aa12.32□□□□□ -0.44
RSC4YKR008W REB1P21538 810 aa12.28□□□□□ -0.44
RSC4YKR008W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.27□□□□□ -0.45not detected
RSC4YKR008W YLR271WQ06152 274 aa12.25□□□□□ -0.45
RSC4YKR008W YAH1Q12184 172 aaKnown RBP12.24□□□□□ -0.45
RSC4YKR008W CKB1P43639 278 aa12.2□□□□□ -0.46
RSC4YKR008W NAP1P25293 417 aaKnown RBP12.19□□□□□ -0.46
RSC4YKR008W AIM44Q99299 758 aa12.17□□□□□ -0.46
RSC4YKR008W MGA2P40578 1113 aa12.11□□□□□ -0.47
RSC4YKR008W SPB4P25808 606 aaPredicted RBP12□□□□□ -0.49
RSC4YKR008W ORC1P54784 914 aaPredicted RBP11.99□□□□□ -0.49
RSC4YKR008W IOC4Q04213 475 aa11.97□□□□□ -0.49
RSC4YKR008W CST9Q06032 482 aa11.97□□□□□ -0.49
RSC4YKR008W YRB30P53107 440 aaPredicted RBP11.95□□□□□ -0.5
RSC4YKR008W PRI1P10363 409 aa11.94□□□□□ -0.5
RSC4YKR008W YIL055CP40523 627 aaKnown RBP11.94□□□□□ -0.5
RSC4YKR008W YPR148CQ06523 435 aa11.89□□□□□ -0.51
RSC4YKR008W YML020WQ03722 664 aa11.85□□□□□ -0.51
RSC4YKR008W VPS70P47161 811 aa11.85□□□□□ -0.51
RSC4YKR008W KIN1P13185 1064 aa11.83□□□□□ -0.52
RSC4YKR008W RSM7P47150 247 aa11.83□□□□□ -0.52
RSC4YKR008W SET1P38827 1080 aaKnown RBP11.81□□□□□ -0.52
RSC4YKR008W NOP8Q08287 484 aaPredicted RBP11.81□□□□□ -0.52
RSC4YKR008W DSF2P38213 736 aa11.76□□□□□ -0.53
RSC4YKR008W RAM2P29703 316 aa11.76□□□□□ -0.53
RSC4YKR008W PSD2P53037 1138 aaKnown RBP11.73□□□□□ -0.53
RSC4YKR008W YNR021WP53723 404 aaKnown RBP11.72□□□□□ -0.53
RSC4YKR008W YKR023WP36119 530 aaKnown RBP11.66□□□□□ -0.54
RSC4YKR008W HGH1P48362 394 aaKnown RBP11.64□□□□□ -0.55
RSC4YKR008W SLX8P40072 274 aa11.63□□□□□ -0.55
RSC4YKR008W PBS2P08018 668 aa11.61□□□□□ -0.55
RSC4YKR008W GLC3P32775 704 aa11.61□□□□□ -0.55
RSC4YKR008W AIM7Q12156 149 aa11.61□□□□□ -0.55
RSC4YKR008W GUA1P38625 525 aaKnown RBP11.6□□□□□ -0.55
RSC4YKR008W TOP1P04786 769 aa11.55□□□□□ -0.56
RSC4YKR008W GEF1P37020 779 aa11.55□□□□□ -0.56
RSC4YKR008W SSA1P10591 642 aaKnown RBP11.53□□□□□ -0.56
RSC4YKR008W AI2P03876 854 aa11.52□□□□□ -0.57
RSC4YKR008W SIS2P36024 562 aa11.51□□□□□ -0.57
RSC4YKR008W SUB2Q07478 446 aaKnown RBP11.51□□□□□ -0.57
RSC4YKR008W MAM3Q12296 706 aa11.49□□□□□ -0.57
RSC4YKR008W DIT2P21595 489 aa11.46□□□□□ -0.58
RSC4YKR008W RCR1P38212 213 aa11.45□□□□□ -0.58
RSC4YKR008W NUP42P49686 430 aaKnown RBP11.45□□□□□ -0.58
RSC4YKR008W SNU71P53207 620 aaKnown RBP11.45□□□□□ -0.58
RSC4YKR008W AAD16Q02895 342 aa11.44□□□□□ -0.58
RSC4YKR008W HPC2Q01448 625 aa11.43□□□□□ -0.58
RSC4YKR008W TSR3Q12094 313 aaKnown RBP11.43□□□□□ -0.58
RSC4YKR008W IES2P40154 320 aa11.42□□□□□ -0.58
RSC4YKR008W YFR016CP43597 1233 aaKnown RBP11.41□□□□□ -0.58
RSC4YKR008W MRX12P47084 519 aa11.41□□□□□ -0.58
RSC4YKR008W TFB3Q03290 321 aa11.39□□□□□ -0.59
RSC4YKR008W TFC8Q12308 588 aa11.38□□□□□ -0.59
RSC4YKR008W HOP09932 586 aa11.38□□□□□ -0.59
RSC4YKR008W NOP7P53261 605 aaKnown RBP11.36□□□□□ -0.59
RSC4YKR008W MAK21Q12176 1025 aaKnown RBP11.34□□□□□ -0.59
RSC4YKR008W MNN4P36044 1178 aa11.34□□□□□ -0.59
RSC4YKR008W MAK11P20484 414 aaKnown RBP11.33□□□□□ -0.6
RSC4YKR008W KRI1P42846 591 aaKnown RBP11.3□□□□□ -0.6
RSC4YKR008W PKC1P24583 1151 aa11.29□□□□□ -0.6
RSC4YKR008W DCD1P06773 312 aa11.29□□□□□ -0.6
RSC4YKR008W MRM1P25270 412 aa11.25□□□□□ -0.61
RSC4YKR008W REF2P42073 533 aaPredicted RBP11.25□□□□□ -0.61
RSC4YKR008W GLN1P32288 370 aaKnown RBP11.25□□□□□ -0.61
RSC4YKR008W PAM1P37304 830 aaKnown RBP11.25□□□□□ -0.61
RSC4YKR008W ATF2P53296 535 aa11.23□□□□□ -0.61
RSC4YKR008W RPS0BP46654 252 aaKnown RBP11.23□□□□□ -0.61
RSC4YKR008W BIM1P40013 344 aa11.22□□□□□ -0.61
RSC4YKR008W BBC1P47068 1157 aa11.22□□□□□ -0.61
RSC4YKR008W COQ8P27697 501 aa11.19□□□□□ -0.62
RSC4YKR008W BRL1P38770 471 aa11.19□□□□□ -0.62
RSC4YKR008W ATG32P40458 529 aa11.19□□□□□ -0.62
RSC4YKR008W SLD2P34252 453 aa11.18□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms