RNA–Protein interactions for RNA: YDR221W

GTB1, Transcript of Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p, yeastyeast

Gene GTB1, Length 2,109 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GTB1YDR221W RQC2Q12532 1038 aaKnown RBP14.61□□□□□ -0.07
GTB1YDR221W BFR2Q06631 534 aaKnown RBP14.02□□□□□ -0.16
GTB1YDR221W TAF7Q05021 590 aa13.15□□□□□ -0.3
GTB1YDR221W URN1Q06525 465 aaKnown RBP12.97□□□□□ -0.33
GTB1YDR221W SIS2P36024 562 aa12.42□□□□□ -0.42
GTB1YDR221W EBP2P36049 427 aaKnown RBP12.4□□□□□ -0.42
GTB1YDR221W TFA1P36100 482 aa12.4□□□□□ -0.42
GTB1YDR221W CAB3P36076 571 aa12.29□□□□□ -0.44
GTB1YDR221W NOP2P40991 618 aaKnown RBP12.21□□□□□ -0.45
GTB1YDR221W AVT3P36062 692 aa12.16□□□□□ -0.46
GTB1YDR221W YFR016CP43597 1233 aaKnown RBP12.15□□□□□ -0.46
GTB1YDR221W DRS1P32892 752 aaKnown RBP12.04□□□□□ -0.48
GTB1YDR221W DIP2Q12220 943 aaPredicted RBP11.81□□□□□ -0.52
GTB1YDR221W KRI1P42846 591 aaKnown RBP11.8□□□□□ -0.52
GTB1YDR221W RPS0BP46654 252 aaKnown RBP11.78□□□□□ -0.52
GTB1YDR221W IOC4Q04213 475 aa11.76□□□□□ -0.53
GTB1YDR221W YRB30P53107 440 aaPredicted RBP11.75□□□□□ -0.53
GTB1YDR221W NAP1P25293 417 aaKnown RBP11.71□□□□□ -0.53
GTB1YDR221W YPR148CQ06523 435 aa11.65□□□□□ -0.55
GTB1YDR221W CWC22P53333 577 aaKnown RBP11.63□□□□□ -0.55
GTB1YDR221W NSR1P27476 414 aaKnown RBP RIP-Chip data11.53□□□□□ -0.56not detected
GTB1YDR221W LEO1P38439 464 aa11.33□□□□□ -0.6
GTB1YDR221W PSH1Q12161 406 aa11.3□□□□□ -0.6
GTB1YDR221W DEF1P35732 738 aaKnown RBP11.26□□□□□ -0.61
GTB1YDR221W ENV11P53246 860 aa11.26□□□□□ -0.61
GTB1YDR221W MNN4P36044 1178 aa11.23□□□□□ -0.61
GTB1YDR221W RSE1Q04693 1361 aaKnown RBP11.21□□□□□ -0.61
GTB1YDR221W SNU71P53207 620 aaKnown RBP11.2□□□□□ -0.62
GTB1YDR221W RLP24Q07915 199 aaKnown RBP11.2□□□□□ -0.62
GTB1YDR221W IFH1P39520 1085 aa11.19□□□□□ -0.62
GTB1YDR221W AIM44Q99299 758 aa11.12□□□□□ -0.63
GTB1YDR221W ORC1P54784 914 aaPredicted RBP11.11□□□□□ -0.63
GTB1YDR221W DMA1P38823 416 aa11.1□□□□□ -0.63
GTB1YDR221W TOP1P04786 769 aa11.07□□□□□ -0.64
GTB1YDR221W NUG1P40010 520 aaKnown RBP11.06□□□□□ -0.64
GTB1YDR221W MDG1P53885 366 aa11.06□□□□□ -0.64
GTB1YDR221W TCB2P48231 1178 aa11.04□□□□□ -0.64
GTB1YDR221W SPT7P35177 1332 aa11.01□□□□□ -0.65
GTB1YDR221W SPT2P06843 333 aaPredicted RBP10.96□□□□□ -0.66
GTB1YDR221W NOP53Q12080 455 aaKnown RBP10.93□□□□□ -0.66
GTB1YDR221W SPT21P35209 758 aa10.91□□□□□ -0.66
GTB1YDR221W TIF4632P39936 914 aaKnown RBP10.82□□□□□ -0.68
GTB1YDR221W RLF2Q12495 606 aa10.82□□□□□ -0.68
GTB1YDR221W YGR130CP53278 816 aa10.82□□□□□ -0.68
GTB1YDR221W RPN1P38764 993 aaKnown RBP10.81□□□□□ -0.68
GTB1YDR221W GRX3Q03835 250 aa10.8□□□□□ -0.68
GTB1YDR221W FPR4Q06205 392 aaPredicted RBP10.8□□□□□ -0.68
GTB1YDR221W HIF1Q12373 385 aa10.78□□□□□ -0.68
GTB1YDR221W RNA1P11745 407 aaKnown RBP10.78□□□□□ -0.68
GTB1YDR221W FPR3P38911 411 aaKnown RBP10.78□□□□□ -0.68
GTB1YDR221W SWE1P32944 819 aa10.77□□□□□ -0.69
GTB1YDR221W HSP82P02829 709 aaKnown RBP10.76□□□□□ -0.69
GTB1YDR221W TOA1P32773 286 aa10.76□□□□□ -0.69
GTB1YDR221W GIN4Q12263 1142 aa10.76□□□□□ -0.69
GTB1YDR221W ENP1P38333 483 aaKnown RBP10.75□□□□□ -0.69
GTB1YDR221W SSA1P10591 642 aaKnown RBP10.73□□□□□ -0.69
GTB1YDR221W SSA2P10592 639 aaKnown RBP10.73□□□□□ -0.69
GTB1YDR221W PLP2Q12017 286 aa10.73□□□□□ -0.69
GTB1YDR221W SUB1P54000 292 aaKnown RBP10.72□□□□□ -0.69
GTB1YDR221W NHA1Q99271 985 aa10.71□□□□□ -0.69
GTB1YDR221W FUN12P39730 1002 aaKnown RBP10.7□□□□□ -0.7
GTB1YDR221W RPS0AP32905 252 aaKnown RBP10.69□□□□□ -0.7
GTB1YDR221W QCR6P00127 147 aa10.68□□□□□ -0.7
GTB1YDR221W YNL011CP53980 444 aa10.68□□□□□ -0.7
GTB1YDR221W TLG1Q03322 224 aa10.66□□□□□ -0.7
GTB1YDR221W SEC3P33332 1336 aaKnown RBP10.66□□□□□ -0.7
GTB1YDR221W ABP1P15891 592 aaKnown RBP10.64□□□□□ -0.71
GTB1YDR221W SPC110P32380 944 aa10.63□□□□□ -0.71
GTB1YDR221W INO80P53115 1489 aa10.61□□□□□ -0.71
GTB1YDR221W YTA7P40340 1379 aa10.61□□□□□ -0.71
GTB1YDR221W ATG36P46983 293 aa10.61□□□□□ -0.71
GTB1YDR221W NMD2P38798 1089 aaKnown RBP10.58□□□□□ -0.72
GTB1YDR221W PIL1P53252 339 aaKnown RBP10.58□□□□□ -0.72
GTB1YDR221W ETT1Q08421 412 aaKnown RBP10.58□□□□□ -0.72
GTB1YDR221W TPO2P53283 614 aa10.58□□□□□ -0.72
GTB1YDR221W CLC1P17891 233 aa10.55□□□□□ -0.72
GTB1YDR221W SPT16P32558 1035 aaKnown RBP10.55□□□□□ -0.72
GTB1YDR221W ISW1P38144 1129 aa10.55□□□□□ -0.72
GTB1YDR221W VPS4P52917 437 aa10.55□□□□□ -0.72
GTB1YDR221W RIX1P38883 763 aaPredicted RBP10.54□□□□□ -0.72
GTB1YDR221W BRL1P38770 471 aa10.54□□□□□ -0.72
GTB1YDR221W DOS2P54858 310 aa10.51□□□□□ -0.73
GTB1YDR221W YSH1Q06224 779 aaPredicted RBP10.49□□□□□ -0.73
GTB1YDR221W MCM1P11746 286 aa10.48□□□□□ -0.73
GTB1YDR221W DAL5P15365 543 aa10.47□□□□□ -0.73
GTB1YDR221W BRN1P38170 754 aa10.47□□□□□ -0.73
GTB1YDR221W MPP10P47083 593 aaKnown RBP10.47□□□□□ -0.73
GTB1YDR221W NNF2P53253 936 aa10.45□□□□□ -0.74
GTB1YDR221W ECM16Q04217 1267 aaKnown RBP10.43□□□□□ -0.74
GTB1YDR221W TAF13P11747 167 aa10.42□□□□□ -0.74
GTB1YDR221W SEC9P40357 651 aa10.42□□□□□ -0.74
GTB1YDR221W TY1B-AO13527 1196 aaKnown RBP10.41□□□□□ -0.74
GTB1YDR221W VPS72Q03388 795 aa10.41□□□□□ -0.74
GTB1YDR221W LAM6Q08001 693 aa10.41□□□□□ -0.74
GTB1YDR221W MSH3P25336 1018 aa10.4□□□□□ -0.74
GTB1YDR221W IME2P32581 645 aa10.4□□□□□ -0.74
GTB1YDR221W MTC1P47018 478 aaKnown RBP10.4□□□□□ -0.74
GTB1YDR221W JSN1P47135 1091 aaKnown RBP RIP-Chip data10.39□□□□□ -0.75 RIP-Chip
GTB1YDR221W DMA2P53924 522 aa10.38□□□□□ -0.75
GTB1YDR221W SAS10Q12136 610 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms