Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
MMP2P08253 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
MMP2P08253 AL356512.1-201ENST00000607453 1739 ntBASIC33.76■■■□□ 2.99
MMP2P08253 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.68■■■□□ 2.98
MMP2P08253 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
MMP2P08253 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
MMP2P08253 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.3■■■□□ 2.92
MMP2P08253 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.05■■■□□ 2.88
MMP2P08253 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.01■■■□□ 2.87
MMP2P08253 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.95■■■□□ 2.86
MMP2P08253 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.8■■■□□ 2.84
MMP2P08253 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.7■■■□□ 2.82
MMP2P08253 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.35■■■□□ 2.77
MMP2P08253 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
MMP2P08253 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
MMP2P08253 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32■■■□□ 2.71
MMP2P08253 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
MMP2P08253 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
MMP2P08253 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
MMP2P08253 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
MMP2P08253 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.77■■■□□ 2.68
MMP2P08253 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
MMP2P08253 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.63■■■□□ 2.65
MMP2P08253 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.5■■■□□ 2.63
MMP2P08253 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.47■■■□□ 2.63
MMP2P08253 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
MMP2P08253 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
MMP2P08253 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
MMP2P08253 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
MMP2P08253 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
MMP2P08253 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
MMP2P08253 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.03■■■□□ 2.56
MMP2P08253 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
MMP2P08253 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.91■■■□□ 2.54
MMP2P08253 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
MMP2P08253 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
MMP2P08253 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.9■■■□□ 2.54
MMP2P08253 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
MMP2P08253 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
MMP2P08253 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
MMP2P08253 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
MMP2P08253 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
MMP2P08253 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
MMP2P08253 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
MMP2P08253 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.58■■■□□ 2.49
MMP2P08253 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.57■■■□□ 2.48
MMP2P08253 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
MMP2P08253 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
MMP2P08253 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
MMP2P08253 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
MMP2P08253 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
MMP2P08253 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.5■■■□□ 2.47
MMP2P08253 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
MMP2P08253 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
MMP2P08253 AC015813.7-201ENST00000623294 581 ntBASIC30.25■■■□□ 2.43
MMP2P08253 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
MMP2P08253 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.17■■■□□ 2.42
MMP2P08253 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
MMP2P08253 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
MMP2P08253 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
MMP2P08253 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
MMP2P08253 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
MMP2P08253 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.98■■■□□ 2.39
MMP2P08253 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.97■■■□□ 2.39
MMP2P08253 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.95■■■□□ 2.39
MMP2P08253 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
MMP2P08253 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
MMP2P08253 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
MMP2P08253 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
MMP2P08253 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
MMP2P08253 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
MMP2P08253 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
MMP2P08253 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.85■■■□□ 2.37
MMP2P08253 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.83■■■□□ 2.37
MMP2P08253 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.83■■■□□ 2.37
MMP2P08253 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
MMP2P08253 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
MMP2P08253 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
MMP2P08253 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
MMP2P08253 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
MMP2P08253 AC006077.2-201ENST00000623591 457 ntBASIC29.65■■■□□ 2.34
MMP2P08253 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
MMP2P08253 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
MMP2P08253 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
MMP2P08253 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
MMP2P08253 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
MMP2P08253 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
MMP2P08253 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
MMP2P08253 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
MMP2P08253 ZNRF2P1-201ENST00000441407 443 ntBASIC29.48■■■□□ 2.31
MMP2P08253 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
MMP2P08253 AC145285.7-201ENST00000614819 1539 ntBASIC29.43■■■□□ 2.3
MMP2P08253 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
MMP2P08253 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.39■■■□□ 2.3
MMP2P08253 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
MMP2P08253 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.35■■■□□ 2.29
MMP2P08253 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
MMP2P08253 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
MMP2P08253 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
MMP2P08253 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms