Protein–RNA interactions for Protein: O94761

RECQL4, ATP-dependent DNA helicase Q4, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4O94761 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.41■■■■□ 3.58
RECQL4O94761 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
RECQL4O94761 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.33■■■■□ 3.41
RECQL4O94761 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
RECQL4O94761 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.23■■■■□ 3.39
RECQL4O94761 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
RECQL4O94761 AL356512.1-201ENST00000607453 1739 ntBASIC36.14■■■■□ 3.38
RECQL4O94761 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.69■■■■□ 3.3
RECQL4O94761 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.29■■■■□ 3.24
RECQL4O94761 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.22■■■■□ 3.23
RECQL4O94761 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.01■■■■□ 3.2
RECQL4O94761 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.95■■■■□ 3.19
RECQL4O94761 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
RECQL4O94761 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.88■■■■□ 3.17
RECQL4O94761 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.76■■■■□ 3.16
RECQL4O94761 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.75■■■■□ 3.15
RECQL4O94761 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.67■■■■□ 3.14
RECQL4O94761 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
RECQL4O94761 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
RECQL4O94761 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.34■■■■□ 3.09
RECQL4O94761 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.3■■■■□ 3.08
RECQL4O94761 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.11■■■■□ 3.05
RECQL4O94761 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
RECQL4O94761 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
RECQL4O94761 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
RECQL4O94761 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.79■■■■□ 3
RECQL4O94761 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
RECQL4O94761 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
RECQL4O94761 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
RECQL4O94761 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.65■■■□□ 2.98
RECQL4O94761 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
RECQL4O94761 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.53■■■□□ 2.96
RECQL4O94761 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.45■■■□□ 2.95
RECQL4O94761 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.45■■■□□ 2.95
RECQL4O94761 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.39■■■□□ 2.93
RECQL4O94761 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
RECQL4O94761 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
RECQL4O94761 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.1■■■□□ 2.89
RECQL4O94761 AC015813.7-201ENST00000623294 581 ntBASIC33.09■■■□□ 2.89
RECQL4O94761 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.08■■■□□ 2.89
RECQL4O94761 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
RECQL4O94761 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RECQL4O94761 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RECQL4O94761 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.95■■■□□ 2.87
RECQL4O94761 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
RECQL4O94761 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.91■■■□□ 2.86
RECQL4O94761 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.9■■■□□ 2.86
RECQL4O94761 AC006077.2-201ENST00000623591 457 ntBASIC32.82■■■□□ 2.84
RECQL4O94761 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
RECQL4O94761 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.77■■■□□ 2.84
RECQL4O94761 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.77■■■□□ 2.84
RECQL4O94761 ZNRF2P1-201ENST00000441407 443 ntBASIC32.73■■■□□ 2.83
RECQL4O94761 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.71■■■□□ 2.83
RECQL4O94761 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.65■■■□□ 2.82
RECQL4O94761 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
RECQL4O94761 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
RECQL4O94761 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
RECQL4O94761 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
RECQL4O94761 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
RECQL4O94761 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.48■■■□□ 2.79
RECQL4O94761 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
RECQL4O94761 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
RECQL4O94761 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
RECQL4O94761 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RECQL4O94761 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RECQL4O94761 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
RECQL4O94761 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RECQL4O94761 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RECQL4O94761 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RECQL4O94761 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.08■■■□□ 2.73
RECQL4O94761 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RECQL4O94761 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32■■■□□ 2.71
RECQL4O94761 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.98■■■□□ 2.71
RECQL4O94761 AP002365.1-201ENST00000603448 772 ntBASIC31.95■■■□□ 2.71
RECQL4O94761 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.91■■■□□ 2.7
RECQL4O94761 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RECQL4O94761 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.87■■■□□ 2.69
RECQL4O94761 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RECQL4O94761 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.83■■■□□ 2.69
RECQL4O94761 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
RECQL4O94761 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RECQL4O94761 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.82■■■□□ 2.68
RECQL4O94761 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.82■■■□□ 2.68
RECQL4O94761 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RECQL4O94761 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
RECQL4O94761 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RECQL4O94761 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.76■■■□□ 2.67
RECQL4O94761 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
RECQL4O94761 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
RECQL4O94761 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
RECQL4O94761 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
RECQL4O94761 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.65■■■□□ 2.66
RECQL4O94761 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RECQL4O94761 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
RECQL4O94761 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RECQL4O94761 DYNLL1-208ENST00000550178 581 ntBASIC31.63■■■□□ 2.65
RECQL4O94761 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
RECQL4O94761 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RECQL4O94761 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.57■■■□□ 2.64
RECQL4O94761 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms