Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
NPHS1O60500 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.57■■■□□ 2.8
NPHS1O60500 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
NPHS1O60500 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.29■■■□□ 2.76
NPHS1O60500 AL356512.1-201ENST00000607453 1739 ntBASIC32.19■■■□□ 2.74
NPHS1O60500 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
NPHS1O60500 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.95■■■□□ 2.7
NPHS1O60500 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
NPHS1O60500 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.57■■■□□ 2.64
NPHS1O60500 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NPHS1O60500 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NPHS1O60500 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NPHS1O60500 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
NPHS1O60500 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.22■■■□□ 2.59
NPHS1O60500 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.09■■■□□ 2.57
NPHS1O60500 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NPHS1O60500 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
NPHS1O60500 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NPHS1O60500 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
NPHS1O60500 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
NPHS1O60500 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
NPHS1O60500 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NPHS1O60500 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
NPHS1O60500 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
NPHS1O60500 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
NPHS1O60500 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
NPHS1O60500 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.4■■■□□ 2.46
NPHS1O60500 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
NPHS1O60500 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.33■■■□□ 2.45
NPHS1O60500 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
NPHS1O60500 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
NPHS1O60500 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.95■■■□□ 2.39
NPHS1O60500 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.89■■■□□ 2.37
NPHS1O60500 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.84■■■□□ 2.37
NPHS1O60500 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
NPHS1O60500 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
NPHS1O60500 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
NPHS1O60500 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.74■■■□□ 2.35
NPHS1O60500 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
NPHS1O60500 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NPHS1O60500 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
NPHS1O60500 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NPHS1O60500 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
NPHS1O60500 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NPHS1O60500 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.41■■■□□ 2.3
NPHS1O60500 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
NPHS1O60500 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
NPHS1O60500 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.32■■■□□ 2.28
NPHS1O60500 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.28■■■□□ 2.28
NPHS1O60500 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
NPHS1O60500 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NPHS1O60500 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NPHS1O60500 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
NPHS1O60500 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.21■■■□□ 2.27
NPHS1O60500 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
NPHS1O60500 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
NPHS1O60500 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
NPHS1O60500 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.11■■■□□ 2.25
NPHS1O60500 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
NPHS1O60500 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
NPHS1O60500 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.93■■■□□ 2.22
NPHS1O60500 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
NPHS1O60500 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
NPHS1O60500 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.87■■■□□ 2.21
NPHS1O60500 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
NPHS1O60500 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
NPHS1O60500 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
NPHS1O60500 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NPHS1O60500 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
NPHS1O60500 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
NPHS1O60500 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
NPHS1O60500 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
NPHS1O60500 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NPHS1O60500 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
NPHS1O60500 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.59■■■□□ 2.17
NPHS1O60500 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
NPHS1O60500 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NPHS1O60500 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.49■■■□□ 2.15
NPHS1O60500 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
NPHS1O60500 AC145285.7-201ENST00000614819 1539 ntBASIC28.49■■■□□ 2.15
NPHS1O60500 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
NPHS1O60500 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.48■■■□□ 2.15
NPHS1O60500 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
NPHS1O60500 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NPHS1O60500 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NPHS1O60500 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NPHS1O60500 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
NPHS1O60500 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
NPHS1O60500 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
NPHS1O60500 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.36■■■□□ 2.13
NPHS1O60500 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
NPHS1O60500 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.33■■■□□ 2.12
NPHS1O60500 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NPHS1O60500 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
NPHS1O60500 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NPHS1O60500 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NPHS1O60500 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NPHS1O60500 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NPHS1O60500 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NPHS1O60500 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms