Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.16■■■■□ 3.38
DCXO43602 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.77■■■■□ 3.32
DCXO43602 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.68■■■■□ 3.3
DCXO43602 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
DCXO43602 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.76■■■■□ 3.16
DCXO43602 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
DCXO43602 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.54■■■■□ 3.12
DCXO43602 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.49■■■■□ 3.11
DCXO43602 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
DCXO43602 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
DCXO43602 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.01■■■■□ 3.03
DCXO43602 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
DCXO43602 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34■■■■□ 3.03
DCXO43602 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.88■■■■□ 3.01
DCXO43602 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
DCXO43602 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.83■■■■□ 3.01
DCXO43602 AL356512.1-201ENST00000607453 1739 ntBASIC33.67■■■□□ 2.98
DCXO43602 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
DCXO43602 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.58■■■□□ 2.97
DCXO43602 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.45■■■□□ 2.95
DCXO43602 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
DCXO43602 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
DCXO43602 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.35■■■□□ 2.93
DCXO43602 ZNRF2P1-201ENST00000441407 443 ntBASIC33.28■■■□□ 2.92
DCXO43602 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
DCXO43602 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.23■■■□□ 2.91
DCXO43602 AC006077.2-201ENST00000623591 457 ntBASIC33.18■■■□□ 2.9
DCXO43602 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.12■■■□□ 2.89
DCXO43602 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
DCXO43602 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33■■■□□ 2.87
DCXO43602 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.82■■■□□ 2.85
DCXO43602 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
DCXO43602 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.76■■■□□ 2.83
DCXO43602 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
DCXO43602 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
DCXO43602 AC015813.7-201ENST00000623294 581 ntBASIC32.52■■■□□ 2.8
DCXO43602 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
DCXO43602 AP002365.1-201ENST00000603448 772 ntBASIC32.41■■■□□ 2.78
DCXO43602 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.41■■■□□ 2.78
DCXO43602 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.2■■■□□ 2.75
DCXO43602 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
DCXO43602 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
DCXO43602 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.08■■■□□ 2.73
DCXO43602 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.06■■■□□ 2.72
DCXO43602 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32■■■□□ 2.71
DCXO43602 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
DCXO43602 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.95■■■□□ 2.71
DCXO43602 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.93■■■□□ 2.7
DCXO43602 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
DCXO43602 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.88■■■□□ 2.69
DCXO43602 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.88■■■□□ 2.69
DCXO43602 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
DCXO43602 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.79■■■□□ 2.68
DCXO43602 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.76■■■□□ 2.67
DCXO43602 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
DCXO43602 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.72■■■□□ 2.67
DCXO43602 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
DCXO43602 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.67
DCXO43602 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.66■■■□□ 2.66
DCXO43602 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
DCXO43602 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.63■■■□□ 2.65
DCXO43602 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
DCXO43602 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.62■■■□□ 2.65
DCXO43602 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
DCXO43602 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
DCXO43602 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.55■■■□□ 2.64
DCXO43602 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.54■■■□□ 2.64
DCXO43602 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
DCXO43602 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
DCXO43602 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
DCXO43602 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.45■■■□□ 2.63
DCXO43602 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.42■■■□□ 2.62
DCXO43602 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.42■■■□□ 2.62
DCXO43602 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
DCXO43602 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
DCXO43602 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DCXO43602 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
DCXO43602 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
DCXO43602 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
DCXO43602 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
DCXO43602 DYNLL1-208ENST00000550178 581 ntBASIC31.26■■■□□ 2.59
DCXO43602 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
DCXO43602 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.25■■■□□ 2.59
DCXO43602 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.23■■■□□ 2.59
DCXO43602 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
DCXO43602 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.23■■■□□ 2.59
DCXO43602 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
DCXO43602 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
DCXO43602 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.19■■■□□ 2.58
DCXO43602 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
DCXO43602 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.14■■■□□ 2.58
DCXO43602 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DCXO43602 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.12■■■□□ 2.57
DCXO43602 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DCXO43602 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DCXO43602 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.1■■■□□ 2.57
DCXO43602 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.09■■■□□ 2.57
DCXO43602 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
DCXO43602 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
DCXO43602 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms