Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.53■■■□□ 2.96
PPM1DO15297 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.65■■■□□ 2.82
PPM1DO15297 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PPM1DO15297 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PPM1DO15297 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
PPM1DO15297 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
PPM1DO15297 AL356512.1-201ENST00000607453 1739 ntBASIC32.29■■■□□ 2.76
PPM1DO15297 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.12■■■□□ 2.73
PPM1DO15297 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.46■■■□□ 2.63
PPM1DO15297 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.42■■■□□ 2.62
PPM1DO15297 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
PPM1DO15297 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
PPM1DO15297 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.27■■■□□ 2.6
PPM1DO15297 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.2■■■□□ 2.58
PPM1DO15297 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.16■■■□□ 2.58
PPM1DO15297 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.14■■■□□ 2.58
PPM1DO15297 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
PPM1DO15297 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.98■■■□□ 2.55
PPM1DO15297 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.89■■■□□ 2.54
PPM1DO15297 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PPM1DO15297 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPM1DO15297 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PPM1DO15297 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
PPM1DO15297 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PPM1DO15297 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PPM1DO15297 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PPM1DO15297 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PPM1DO15297 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.25■■■□□ 2.43
PPM1DO15297 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PPM1DO15297 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.17■■■□□ 2.42
PPM1DO15297 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPM1DO15297 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
PPM1DO15297 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.4
PPM1DO15297 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
PPM1DO15297 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30■■■□□ 2.39
PPM1DO15297 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.89■■■□□ 2.38
PPM1DO15297 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
PPM1DO15297 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PPM1DO15297 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
PPM1DO15297 AC015813.7-201ENST00000623294 581 ntBASIC29.76■■■□□ 2.35
PPM1DO15297 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.68■■■□□ 2.34
PPM1DO15297 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.62■■■□□ 2.33
PPM1DO15297 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
PPM1DO15297 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PPM1DO15297 AC006077.2-201ENST00000623591 457 ntBASIC29.57■■■□□ 2.32
PPM1DO15297 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.56■■■□□ 2.32
PPM1DO15297 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.54■■■□□ 2.32
PPM1DO15297 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
PPM1DO15297 ZNRF2P1-201ENST00000441407 443 ntBASIC29.5■■■□□ 2.31
PPM1DO15297 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
PPM1DO15297 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PPM1DO15297 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PPM1DO15297 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.33■■■□□ 2.29
PPM1DO15297 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.28■■■□□ 2.28
PPM1DO15297 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PPM1DO15297 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
PPM1DO15297 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.2■■■□□ 2.27
PPM1DO15297 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PPM1DO15297 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
PPM1DO15297 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
PPM1DO15297 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
PPM1DO15297 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
PPM1DO15297 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.01■■■□□ 2.23
PPM1DO15297 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PPM1DO15297 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PPM1DO15297 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PPM1DO15297 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
PPM1DO15297 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PPM1DO15297 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.83■■■□□ 2.21
PPM1DO15297 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PPM1DO15297 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PPM1DO15297 AP002365.1-201ENST00000603448 772 ntBASIC28.78■■■□□ 2.2
PPM1DO15297 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PPM1DO15297 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PPM1DO15297 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PPM1DO15297 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.67■■■□□ 2.18
PPM1DO15297 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.66■■■□□ 2.18
PPM1DO15297 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
PPM1DO15297 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
PPM1DO15297 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.63■■■□□ 2.17
PPM1DO15297 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PPM1DO15297 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.6■■■□□ 2.17
PPM1DO15297 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.6■■■□□ 2.17
PPM1DO15297 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PPM1DO15297 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PPM1DO15297 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.54■■■□□ 2.16
PPM1DO15297 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PPM1DO15297 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
PPM1DO15297 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
PPM1DO15297 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.48■■■□□ 2.15
PPM1DO15297 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
PPM1DO15297 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPM1DO15297 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPM1DO15297 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PPM1DO15297 DYNLL1-208ENST00000550178 581 ntBASIC28.42■■■□□ 2.14
PPM1DO15297 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.42■■■□□ 2.14
PPM1DO15297 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
PPM1DO15297 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.39■■■□□ 2.14
PPM1DO15297 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PPM1DO15297 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 229.5 ms