Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
TNFSF11O14788 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TNFSF11O14788 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
TNFSF11O14788 AL356512.1-201ENST00000607453 1739 ntBASIC29.92■■■□□ 2.38
TNFSF11O14788 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TNFSF11O14788 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TNFSF11O14788 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.62■■■□□ 2.33
TNFSF11O14788 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.37■■■□□ 2.29
TNFSF11O14788 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.14■■■□□ 2.25
TNFSF11O14788 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.13■■■□□ 2.25
TNFSF11O14788 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.06■■■□□ 2.24
TNFSF11O14788 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.92■■■□□ 2.22
TNFSF11O14788 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.86■■■□□ 2.21
TNFSF11O14788 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
TNFSF11O14788 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TNFSF11O14788 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.57■■■□□ 2.16
TNFSF11O14788 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
TNFSF11O14788 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.43■■■□□ 2.14
TNFSF11O14788 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
TNFSF11O14788 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.31■■■□□ 2.12
TNFSF11O14788 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
TNFSF11O14788 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
TNFSF11O14788 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
TNFSF11O14788 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TNFSF11O14788 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
TNFSF11O14788 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.75■■■□□ 2.03
TNFSF11O14788 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TNFSF11O14788 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
TNFSF11O14788 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
TNFSF11O14788 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TNFSF11O14788 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.65■■■□□ 2.02
TNFSF11O14788 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TNFSF11O14788 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TNFSF11O14788 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TNFSF11O14788 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
TNFSF11O14788 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.51■■□□□ 1.99
TNFSF11O14788 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
TNFSF11O14788 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.49■■□□□ 1.99
TNFSF11O14788 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TNFSF11O14788 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.42■■□□□ 1.98
TNFSF11O14788 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.39■■□□□ 1.98
TNFSF11O14788 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TNFSF11O14788 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
TNFSF11O14788 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
TNFSF11O14788 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.27■■□□□ 1.96
TNFSF11O14788 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TNFSF11O14788 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TNFSF11O14788 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
TNFSF11O14788 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TNFSF11O14788 AC015813.7-201ENST00000623294 581 ntBASIC27.05■■□□□ 1.92
TNFSF11O14788 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
TNFSF11O14788 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.95■■□□□ 1.91
TNFSF11O14788 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TNFSF11O14788 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TNFSF11O14788 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.88■■□□□ 1.89
TNFSF11O14788 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.84■■□□□ 1.89
TNFSF11O14788 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.81■■□□□ 1.88
TNFSF11O14788 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TNFSF11O14788 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TNFSF11O14788 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TNFSF11O14788 AC006077.2-201ENST00000623591 457 ntBASIC26.68■■□□□ 1.86
TNFSF11O14788 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.65■■□□□ 1.86
TNFSF11O14788 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TNFSF11O14788 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TNFSF11O14788 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
TNFSF11O14788 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TNFSF11O14788 ZNRF2P1-201ENST00000441407 443 ntBASIC26.57■■□□□ 1.84
TNFSF11O14788 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
TNFSF11O14788 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TNFSF11O14788 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TNFSF11O14788 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TNFSF11O14788 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TNFSF11O14788 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TNFSF11O14788 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TNFSF11O14788 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
TNFSF11O14788 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
TNFSF11O14788 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TNFSF11O14788 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
TNFSF11O14788 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNFSF11O14788 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNFSF11O14788 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TNFSF11O14788 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TNFSF11O14788 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TNFSF11O14788 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.22■■□□□ 1.79
TNFSF11O14788 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
TNFSF11O14788 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TNFSF11O14788 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
TNFSF11O14788 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
TNFSF11O14788 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.16■■□□□ 1.78
TNFSF11O14788 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.15■■□□□ 1.78
TNFSF11O14788 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TNFSF11O14788 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.12■■□□□ 1.77
TNFSF11O14788 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
TNFSF11O14788 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TNFSF11O14788 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.01■■□□□ 1.75
TNFSF11O14788 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.01■■□□□ 1.75
TNFSF11O14788 AC145285.7-201ENST00000614819 1539 ntBASIC26■■□□□ 1.75
TNFSF11O14788 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TNFSF11O14788 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.99■■□□□ 1.75
TNFSF11O14788 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms