Protein–RNA interactions for Protein: O14745

SLC9A3R1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, humanhuman

Predicted RBP Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1O14745 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.66■■■■□ 3.3
SLC9A3R1O14745 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.91■■■■□ 3.18
SLC9A3R1O14745 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
SLC9A3R1O14745 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
SLC9A3R1O14745 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
SLC9A3R1O14745 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.45■■■■□ 3.1
SLC9A3R1O14745 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.3■■■■□ 3.08
SLC9A3R1O14745 AL356512.1-201ENST00000607453 1739 ntBASIC34.29■■■■□ 3.08
SLC9A3R1O14745 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
SLC9A3R1O14745 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.44■■■□□ 2.94
SLC9A3R1O14745 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.4■■■□□ 2.94
SLC9A3R1O14745 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.33■■■□□ 2.93
SLC9A3R1O14745 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.31■■■□□ 2.92
SLC9A3R1O14745 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.3■■■□□ 2.92
SLC9A3R1O14745 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.22■■■□□ 2.91
SLC9A3R1O14745 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.06■■■□□ 2.88
SLC9A3R1O14745 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
SLC9A3R1O14745 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.91■■■□□ 2.86
SLC9A3R1O14745 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
SLC9A3R1O14745 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SLC9A3R1O14745 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
SLC9A3R1O14745 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SLC9A3R1O14745 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
SLC9A3R1O14745 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SLC9A3R1O14745 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SLC9A3R1O14745 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.3■■■□□ 2.76
SLC9A3R1O14745 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SLC9A3R1O14745 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
SLC9A3R1O14745 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.19■■■□□ 2.74
SLC9A3R1O14745 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SLC9A3R1O14745 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SLC9A3R1O14745 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.08■■■□□ 2.73
SLC9A3R1O14745 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
SLC9A3R1O14745 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SLC9A3R1O14745 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.76■■■□□ 2.67
SLC9A3R1O14745 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
SLC9A3R1O14745 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SLC9A3R1O14745 AC015813.7-201ENST00000623294 581 ntBASIC31.7■■■□□ 2.67
SLC9A3R1O14745 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SLC9A3R1O14745 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.63■■■□□ 2.65
SLC9A3R1O14745 AC006077.2-201ENST00000623591 457 ntBASIC31.63■■■□□ 2.65
SLC9A3R1O14745 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.62■■■□□ 2.65
SLC9A3R1O14745 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SLC9A3R1O14745 ZNRF2P1-201ENST00000441407 443 ntBASIC31.53■■■□□ 2.64
SLC9A3R1O14745 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
SLC9A3R1O14745 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
SLC9A3R1O14745 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SLC9A3R1O14745 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SLC9A3R1O14745 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.18■■■□□ 2.58
SLC9A3R1O14745 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SLC9A3R1O14745 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SLC9A3R1O14745 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.09■■■□□ 2.57
SLC9A3R1O14745 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.05■■■□□ 2.56
SLC9A3R1O14745 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SLC9A3R1O14745 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.01■■■□□ 2.55
SLC9A3R1O14745 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.98■■■□□ 2.55
SLC9A3R1O14745 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
SLC9A3R1O14745 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SLC9A3R1O14745 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
SLC9A3R1O14745 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SLC9A3R1O14745 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SLC9A3R1O14745 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
SLC9A3R1O14745 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SLC9A3R1O14745 AP002365.1-201ENST00000603448 772 ntBASIC30.75■■■□□ 2.51
SLC9A3R1O14745 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
SLC9A3R1O14745 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.72■■■□□ 2.51
SLC9A3R1O14745 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SLC9A3R1O14745 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SLC9A3R1O14745 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SLC9A3R1O14745 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.67■■■□□ 2.5
SLC9A3R1O14745 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SLC9A3R1O14745 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC9A3R1O14745 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.54■■■□□ 2.48
SLC9A3R1O14745 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.54■■■□□ 2.48
SLC9A3R1O14745 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.53■■■□□ 2.48
SLC9A3R1O14745 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.5■■■□□ 2.47
SLC9A3R1O14745 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SLC9A3R1O14745 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.47■■■□□ 2.47
SLC9A3R1O14745 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.46■■■□□ 2.47
SLC9A3R1O14745 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SLC9A3R1O14745 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
SLC9A3R1O14745 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC9A3R1O14745 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC9A3R1O14745 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.35■■■□□ 2.45
SLC9A3R1O14745 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SLC9A3R1O14745 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.34■■■□□ 2.45
SLC9A3R1O14745 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
SLC9A3R1O14745 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLC9A3R1O14745 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SLC9A3R1O14745 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.29■■■□□ 2.44
SLC9A3R1O14745 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SLC9A3R1O14745 DYNLL1-208ENST00000550178 581 ntBASIC30.27■■■□□ 2.44
SLC9A3R1O14745 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
SLC9A3R1O14745 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.25■■■□□ 2.43
SLC9A3R1O14745 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
SLC9A3R1O14745 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SLC9A3R1O14745 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SLC9A3R1O14745 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SLC9A3R1O14745 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SLC9A3R1O14745 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms