Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.17■■■■□ 3.06
TLR4O00206 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.58■■■□□ 2.97
TLR4O00206 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
TLR4O00206 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.05■■■□□ 2.88
TLR4O00206 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
TLR4O00206 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
TLR4O00206 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.86
TLR4O00206 AL356512.1-201ENST00000607453 1739 ntBASIC32.75■■■□□ 2.83
TLR4O00206 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
TLR4O00206 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.02■■■□□ 2.72
TLR4O00206 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32■■■□□ 2.71
TLR4O00206 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.95■■■□□ 2.7
TLR4O00206 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.93■■■□□ 2.7
TLR4O00206 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
TLR4O00206 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.75■■■□□ 2.67
TLR4O00206 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
TLR4O00206 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
TLR4O00206 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
TLR4O00206 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.49■■■□□ 2.63
TLR4O00206 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TLR4O00206 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.32■■■□□ 2.6
TLR4O00206 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TLR4O00206 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
TLR4O00206 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TLR4O00206 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
TLR4O00206 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TLR4O00206 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.09■■■□□ 2.57
TLR4O00206 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
TLR4O00206 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TLR4O00206 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.92■■■□□ 2.54
TLR4O00206 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
TLR4O00206 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TLR4O00206 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
TLR4O00206 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.5■■■□□ 2.47
TLR4O00206 AC015813.7-201ENST00000623294 581 ntBASIC30.49■■■□□ 2.47
TLR4O00206 AC006077.2-201ENST00000623591 457 ntBASIC30.49■■■□□ 2.47
TLR4O00206 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.47■■■□□ 2.47
TLR4O00206 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.44■■■□□ 2.46
TLR4O00206 ZNRF2P1-201ENST00000441407 443 ntBASIC30.43■■■□□ 2.46
TLR4O00206 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.41■■■□□ 2.46
TLR4O00206 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TLR4O00206 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
TLR4O00206 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
TLR4O00206 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TLR4O00206 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
TLR4O00206 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
TLR4O00206 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
TLR4O00206 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
TLR4O00206 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
TLR4O00206 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
TLR4O00206 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
TLR4O00206 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.93■■■□□ 2.38
TLR4O00206 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TLR4O00206 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TLR4O00206 AP002365.1-201ENST00000603448 772 ntBASIC29.67■■■□□ 2.34
TLR4O00206 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TLR4O00206 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.58■■■□□ 2.33
TLR4O00206 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
TLR4O00206 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.57■■■□□ 2.32
TLR4O00206 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TLR4O00206 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TLR4O00206 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.55■■■□□ 2.32
TLR4O00206 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.49■■■□□ 2.31
TLR4O00206 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
TLR4O00206 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.48■■■□□ 2.31
TLR4O00206 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.48■■■□□ 2.31
TLR4O00206 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
TLR4O00206 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.46■■■□□ 2.31
TLR4O00206 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.44■■■□□ 2.3
TLR4O00206 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
TLR4O00206 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TLR4O00206 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
TLR4O00206 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
TLR4O00206 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.42■■■□□ 2.3
TLR4O00206 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
TLR4O00206 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.41■■■□□ 2.3
TLR4O00206 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.38■■■□□ 2.29
TLR4O00206 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
TLR4O00206 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
TLR4O00206 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TLR4O00206 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
TLR4O00206 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.31■■■□□ 2.28
TLR4O00206 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
TLR4O00206 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.29■■■□□ 2.28
TLR4O00206 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.26■■■□□ 2.27
TLR4O00206 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
TLR4O00206 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
TLR4O00206 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.18■■■□□ 2.26
TLR4O00206 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
TLR4O00206 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
TLR4O00206 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
TLR4O00206 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
TLR4O00206 DYNLL1-208ENST00000550178 581 ntBASIC29.15■■■□□ 2.26
TLR4O00206 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
TLR4O00206 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
TLR4O00206 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
TLR4O00206 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.05■■■□□ 2.24
TLR4O00206 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
TLR4O00206 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.04■■■□□ 2.24
TLR4O00206 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms