Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
LRCOL1A6NCL2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRCOL1A6NCL2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.09■■□□□ 1.13
LRCOL1A6NCL2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRCOL1A6NCL2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
LRCOL1A6NCL2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCOL1A6NCL2 AL356512.1-201ENST00000607453 1739 ntBASIC21.93■■□□□ 1.1
LRCOL1A6NCL2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRCOL1A6NCL2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
LRCOL1A6NCL2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.42■■□□□ 1.02
LRCOL1A6NCL2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRCOL1A6NCL2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.23■□□□□ 0.99
LRCOL1A6NCL2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
LRCOL1A6NCL2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LRCOL1A6NCL2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.18■□□□□ 0.98
LRCOL1A6NCL2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.09■□□□□ 0.97
LRCOL1A6NCL2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC21.08■□□□□ 0.96
LRCOL1A6NCL2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.06■□□□□ 0.96
LRCOL1A6NCL2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LRCOL1A6NCL2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRCOL1A6NCL2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LRCOL1A6NCL2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC20.8■□□□□ 0.92
LRCOL1A6NCL2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRCOL1A6NCL2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRCOL1A6NCL2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRCOL1A6NCL2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCOL1A6NCL2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRCOL1A6NCL2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRCOL1A6NCL2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCOL1A6NCL2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRCOL1A6NCL2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.44■□□□□ 0.86
LRCOL1A6NCL2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCOL1A6NCL2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.36■□□□□ 0.85
LRCOL1A6NCL2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LRCOL1A6NCL2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCOL1A6NCL2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCOL1A6NCL2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.26■□□□□ 0.83
LRCOL1A6NCL2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCOL1A6NCL2 AC015813.7-201ENST00000623294 581 ntBASIC20.13■□□□□ 0.81
LRCOL1A6NCL2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRCOL1A6NCL2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRCOL1A6NCL2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRCOL1A6NCL2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
LRCOL1A6NCL2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC20.03■□□□□ 0.8
LRCOL1A6NCL2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCOL1A6NCL2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20■□□□□ 0.79
LRCOL1A6NCL2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCOL1A6NCL2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.99■□□□□ 0.79
LRCOL1A6NCL2 AC006077.2-201ENST00000623591 457 ntBASIC19.97■□□□□ 0.79
LRCOL1A6NCL2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
LRCOL1A6NCL2 ZNRF2P1-201ENST00000441407 443 ntBASIC19.91■□□□□ 0.78
LRCOL1A6NCL2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LRCOL1A6NCL2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.87■□□□□ 0.77
LRCOL1A6NCL2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LRCOL1A6NCL2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRCOL1A6NCL2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.82■□□□□ 0.76
LRCOL1A6NCL2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRCOL1A6NCL2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRCOL1A6NCL2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LRCOL1A6NCL2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRCOL1A6NCL2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRCOL1A6NCL2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.69■□□□□ 0.74
LRCOL1A6NCL2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCOL1A6NCL2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LRCOL1A6NCL2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRCOL1A6NCL2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRCOL1A6NCL2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRCOL1A6NCL2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRCOL1A6NCL2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LRCOL1A6NCL2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCOL1A6NCL2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRCOL1A6NCL2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.49■□□□□ 0.71
LRCOL1A6NCL2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCOL1A6NCL2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRCOL1A6NCL2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCOL1A6NCL2 AP002365.1-201ENST00000603448 772 ntBASIC19.43■□□□□ 0.7
LRCOL1A6NCL2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.42■□□□□ 0.7
LRCOL1A6NCL2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.39■□□□□ 0.69
LRCOL1A6NCL2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCOL1A6NCL2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCOL1A6NCL2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.37■□□□□ 0.69
LRCOL1A6NCL2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.36■□□□□ 0.69
LRCOL1A6NCL2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCOL1A6NCL2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
LRCOL1A6NCL2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCOL1A6NCL2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCOL1A6NCL2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCOL1A6NCL2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRCOL1A6NCL2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.29■□□□□ 0.68
LRCOL1A6NCL2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRCOL1A6NCL2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCOL1A6NCL2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRCOL1A6NCL2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LRCOL1A6NCL2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCOL1A6NCL2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCOL1A6NCL2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.23■□□□□ 0.67
LRCOL1A6NCL2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRCOL1A6NCL2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRCOL1A6NCL2 DYNLL1-208ENST00000550178 581 ntBASIC19.21■□□□□ 0.67
LRCOL1A6NCL2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms