Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
SH3D21A4FU49 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.36■■■□□ 2.45
SH3D21A4FU49 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SH3D21A4FU49 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
SH3D21A4FU49 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.74■■■□□ 2.35
SH3D21A4FU49 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.59■■■□□ 2.33
SH3D21A4FU49 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SH3D21A4FU49 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
SH3D21A4FU49 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.39■■■□□ 2.3
SH3D21A4FU49 AL356512.1-201ENST00000607453 1739 ntBASIC29.37■■■□□ 2.29
SH3D21A4FU49 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SH3D21A4FU49 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
SH3D21A4FU49 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SH3D21A4FU49 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.14■■■□□ 2.26
SH3D21A4FU49 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
SH3D21A4FU49 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.11■■■□□ 2.25
SH3D21A4FU49 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SH3D21A4FU49 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.02■■■□□ 2.24
SH3D21A4FU49 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
SH3D21A4FU49 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.88■■■□□ 2.21
SH3D21A4FU49 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.75■■■□□ 2.19
SH3D21A4FU49 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SH3D21A4FU49 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
SH3D21A4FU49 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
SH3D21A4FU49 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.45■■■□□ 2.14
SH3D21A4FU49 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
SH3D21A4FU49 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SH3D21A4FU49 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SH3D21A4FU49 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.26■■■□□ 2.11
SH3D21A4FU49 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SH3D21A4FU49 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.18■■■□□ 2.1
SH3D21A4FU49 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.15■■■□□ 2.1
SH3D21A4FU49 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
SH3D21A4FU49 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
SH3D21A4FU49 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
SH3D21A4FU49 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
SH3D21A4FU49 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.94■■■□□ 2.06
SH3D21A4FU49 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
SH3D21A4FU49 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
SH3D21A4FU49 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
SH3D21A4FU49 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
SH3D21A4FU49 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SH3D21A4FU49 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SH3D21A4FU49 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SH3D21A4FU49 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SH3D21A4FU49 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SH3D21A4FU49 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.55■■■□□ 2
SH3D21A4FU49 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
SH3D21A4FU49 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.49■■□□□ 1.99
SH3D21A4FU49 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SH3D21A4FU49 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SH3D21A4FU49 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SH3D21A4FU49 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
SH3D21A4FU49 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SH3D21A4FU49 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.41■■□□□ 1.98
SH3D21A4FU49 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SH3D21A4FU49 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
SH3D21A4FU49 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SH3D21A4FU49 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
SH3D21A4FU49 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SH3D21A4FU49 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SH3D21A4FU49 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.21■■□□□ 1.95
SH3D21A4FU49 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.19■■□□□ 1.94
SH3D21A4FU49 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SH3D21A4FU49 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
SH3D21A4FU49 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SH3D21A4FU49 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SH3D21A4FU49 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.05■■□□□ 1.92
SH3D21A4FU49 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SH3D21A4FU49 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SH3D21A4FU49 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SH3D21A4FU49 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SH3D21A4FU49 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
SH3D21A4FU49 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.87■■□□□ 1.89
SH3D21A4FU49 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SH3D21A4FU49 AC006077.2-201ENST00000623591 457 ntBASIC26.85■■□□□ 1.89
SH3D21A4FU49 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.84■■□□□ 1.89
SH3D21A4FU49 AC015813.7-201ENST00000623294 581 ntBASIC26.83■■□□□ 1.89
SH3D21A4FU49 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
SH3D21A4FU49 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SH3D21A4FU49 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.82■■□□□ 1.88
SH3D21A4FU49 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
SH3D21A4FU49 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.8■■□□□ 1.88
SH3D21A4FU49 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SH3D21A4FU49 ZNRF2P1-201ENST00000441407 443 ntBASIC26.8■■□□□ 1.88
SH3D21A4FU49 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
SH3D21A4FU49 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.79■■□□□ 1.88
SH3D21A4FU49 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
SH3D21A4FU49 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
SH3D21A4FU49 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.75■■□□□ 1.87
SH3D21A4FU49 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SH3D21A4FU49 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.69■■□□□ 1.86
SH3D21A4FU49 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SH3D21A4FU49 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SH3D21A4FU49 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SH3D21A4FU49 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
SH3D21A4FU49 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SH3D21A4FU49 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SH3D21A4FU49 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.56■■□□□ 1.84
SH3D21A4FU49 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms