Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 KRT8P41-201ENST00000533985 1514 ntBASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 AL355802.2-201ENST00000402069 882 ntBASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
POLR2J3Q9H1A7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 NOC2LP1-202ENST00000452600 2235 ntBASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR2J3Q9H1A7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 AL445675.2-201ENST00000620291 557 ntBASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR2J3Q9H1A7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms