Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX4O95219 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.76■□□□□ 0.43
SNX4O95219 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNX4O95219 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX4O95219 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.76■□□□□ 0.43
SNX4O95219 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SNX4O95219 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX4O95219 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX4O95219 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.75■□□□□ 0.43
SNX4O95219 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNX4O95219 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
SNX4O95219 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.75■□□□□ 0.43
SNX4O95219 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNX4O95219 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX4O95219 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX4O95219 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNX4O95219 AP003071.4-201ENST00000562276 1284 ntBASIC17.75■□□□□ 0.43
SNX4O95219 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
SNX4O95219 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX4O95219 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX4O95219 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX4O95219 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNX4O95219 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX4O95219 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SNX4O95219 LTB4R2-202ENST00000528054 3092 ntBASIC17.75■□□□□ 0.43
SNX4O95219 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SNX4O95219 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNX4O95219 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX4O95219 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SNX4O95219 AL032819.2-201ENST00000624543 2162 ntBASIC17.74■□□□□ 0.43
SNX4O95219 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX4O95219 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX4O95219 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX4O95219 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SNX4O95219 TREX1-205ENST00000625293 1783 ntBASIC17.74■□□□□ 0.43
SNX4O95219 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.74■□□□□ 0.43
SNX4O95219 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX4O95219 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX4O95219 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX4O95219 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX4O95219 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.74■□□□□ 0.43
SNX4O95219 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX4O95219 HLA-A-209ENST00000638375 975 ntBASIC17.74■□□□□ 0.43
SNX4O95219 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX4O95219 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX4O95219 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX4O95219 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX4O95219 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SNX4O95219 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SNX4O95219 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX4O95219 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX4O95219 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SNX4O95219 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX4O95219 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX4O95219 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX4O95219 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX4O95219 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SNX4O95219 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.73■□□□□ 0.43
SNX4O95219 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.73■□□□□ 0.43
SNX4O95219 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX4O95219 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX4O95219 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX4O95219 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX4O95219 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
SNX4O95219 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
SNX4O95219 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNX4O95219 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNX4O95219 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNX4O95219 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SNX4O95219 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX4O95219 FSCN1P1-201ENST00000568912 1481 ntBASIC17.72■□□□□ 0.43
SNX4O95219 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms