Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.21■□□□□ 0.67
RIPK2O43353 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.21■□□□□ 0.67
RIPK2O43353 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.21■□□□□ 0.67
RIPK2O43353 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK2O43353 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK2O43353 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
RIPK2O43353 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
RIPK2O43353 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK2O43353 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK2O43353 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK2O43353 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
RIPK2O43353 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.2■□□□□ 0.66
RIPK2O43353 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.2■□□□□ 0.66
RIPK2O43353 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.2■□□□□ 0.66
RIPK2O43353 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.2■□□□□ 0.66
RIPK2O43353 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.2■□□□□ 0.66
RIPK2O43353 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
RIPK2O43353 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.2■□□□□ 0.66
RIPK2O43353 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 AL050303.2-201ENST00000619798 666 ntBASIC19.2■□□□□ 0.66
RIPK2O43353 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RIPK2O43353 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.2■□□□□ 0.66
RIPK2O43353 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK2O43353 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RIPK2O43353 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RIPK2O43353 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.19■□□□□ 0.66
RIPK2O43353 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.19■□□□□ 0.66
RIPK2O43353 DUSP5P2-201ENST00000426873 1033 ntBASIC19.19■□□□□ 0.66
RIPK2O43353 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RIPK2O43353 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.19■□□□□ 0.66
RIPK2O43353 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RIPK2O43353 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.19■□□□□ 0.66
RIPK2O43353 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.19■□□□□ 0.66
RIPK2O43353 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.19■□□□□ 0.66
RIPK2O43353 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
RIPK2O43353 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK2O43353 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
RIPK2O43353 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RIPK2O43353 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RIPK2O43353 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.18■□□□□ 0.66
RIPK2O43353 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.18■□□□□ 0.66
RIPK2O43353 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RIPK2O43353 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.18■□□□□ 0.66
RIPK2O43353 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.18■□□□□ 0.66
RIPK2O43353 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.18■□□□□ 0.66
RIPK2O43353 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.18■□□□□ 0.66
RIPK2O43353 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIPK2O43353 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.17■□□□□ 0.66
RIPK2O43353 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK2O43353 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RIPK2O43353 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK2O43353 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK2O43353 AC135776.1-201ENST00000319817 2481 ntBASIC19.17■□□□□ 0.66
RIPK2O43353 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK2O43353 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK2O43353 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.17■□□□□ 0.66
RIPK2O43353 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.17■□□□□ 0.66
RIPK2O43353 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK2O43353 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RIPK2O43353 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK2O43353 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms