Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 SNAI3-AS1-205ENST00000568633 2096 ntBASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 HGH1-207ENST00000628266 258 ntTSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 AC067750.1-201ENST00000608826 6545 ntBASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 PCDHA3-202ENST00000532566 4594 ntBASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 AL034346.1-201ENST00000568244 1277 ntBASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CHKB-CPT1BH3BT56 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CHKB-CPT1BH3BT56 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHKB-CPT1BH3BT56 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CHKB-CPT1BH3BT56 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CHKB-CPT1BH3BT56 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC10.49□□□□□ -0.73
CHKB-CPT1BH3BT56 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
CHKB-CPT1BH3BT56 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHKB-CPT1BH3BT56 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CHKB-CPT1BH3BT56 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms