RNA–Protein interactions for RNA: ENST00000287777.4

KLHL40-201, Transcript of kelch like family member 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL40, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL40-201ENST00000287777 NISCHQ9Y2I1 1504 aa39.64■■■■□ 3.94
KLHL40-201ENST00000287777 CCDC180Q9P1Z9 1646 aa34■■■■□ 3.03
KLHL40-201ENST00000287777 ZCCHC6Q5VYS8 1495 aaKnown RBP33.51■■■□□ 2.96
KLHL40-201ENST00000287777 SHROOM4Q9ULL8 1493 aa33.31■■■□□ 2.92
KLHL40-201ENST00000287777 DCAF1Q9Y4B6 1507 aa32.66■■■□□ 2.82
KLHL40-201ENST00000287777 DCAF8L2P0C7V8 631 aa32.58■■■□□ 2.81
KLHL40-201ENST00000287777 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
KLHL40-201ENST00000287777 MYO15BQ96JP2 1530 aa31.84■■■□□ 2.69
KLHL40-201ENST00000287777 SCRIBQ14160 1630 aa31.61■■■□□ 2.65
KLHL40-201ENST00000287777 CHIC1Q5VXU3 224 aa31.6■■■□□ 2.65
KLHL40-201ENST00000287777 ABCC9O60706 1549 aa31.6■■■□□ 2.65
KLHL40-201ENST00000287777 NACADO15069 1562 aa31.41■■■□□ 2.62
KLHL40-201ENST00000287777 RSF1Q96T23 1441 aaPredicted RBP31.19■■■□□ 2.58
KLHL40-201ENST00000287777 RB1CC1Q8TDY2 1594 aa30.94■■■□□ 2.54
KLHL40-201ENST00000287777 CECR2Q9BXF3 1484 aa30.83■■■□□ 2.53
KLHL40-201ENST00000287777 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
KLHL40-201ENST00000287777 WIZO95785 1651 aa30.59■■■□□ 2.49
KLHL40-201ENST00000287777 LOC105371045A0A1W2PR82 267 aa30.53■■■□□ 2.48
KLHL40-201ENST00000287777 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
KLHL40-201ENST00000287777 BAZ1AQ9NRL2 1556 aaPredicted RBP30.5■■■□□ 2.47
KLHL40-201ENST00000287777 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
KLHL40-201ENST00000287777 SMARCA4P51532 1647 aa30.28■■■□□ 2.44
KLHL40-201ENST00000287777 PCGF6Q9BYE7 350 aa30.23■■■□□ 2.43
KLHL40-201ENST00000287777 TOP2AP11388 1531 aaKnown RBP30.18■■■□□ 2.42
KLHL40-201ENST00000287777 EIF4G1Q04637 1599 aaKnown RBP30.17■■■□□ 2.42
KLHL40-201ENST00000287777 HRCP23327 699 aa30.15■■■□□ 2.42
KLHL40-201ENST00000287777 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
KLHL40-201ENST00000287777 FAM9AQ8IZU1 332 aaPredicted RBP30.01■■■□□ 2.4
KLHL40-201ENST00000287777 SMARCA2P51531 1590 aa29.98■■■□□ 2.39
KLHL40-201ENST00000287777 CCDC88BA6NC98 1476 aa29.95■■■□□ 2.38
KLHL40-201ENST00000287777 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.37
KLHL40-201ENST00000287777 TRIM26Q12899 539 aaPredicted RBP29.84■■■□□ 2.37
KLHL40-201ENST00000287777 PEG3Q9GZU2 1588 aa29.78■■■□□ 2.36
KLHL40-201ENST00000287777 ABCC8Q09428 1581 aa29.75■■■□□ 2.35
KLHL40-201ENST00000287777 EHMT2Q96KQ7 1210 aa29.67■■■□□ 2.34
KLHL40-201ENST00000287777 ATAD2BQ9ULI0 1458 aa29.51■■■□□ 2.31
KLHL40-201ENST00000287777 PPARGC1BQ86YN6 1023 aaKnown RBP29.43■■■□□ 2.3
KLHL40-201ENST00000287777 BAZ1BQ9UIG0 1483 aaKnown RBP29.41■■■□□ 2.3
KLHL40-201ENST00000287777 SOGA1O94964 1423 aa29.38■■■□□ 2.29
KLHL40-201ENST00000287777 EEA1Q15075 1411 aa29.34■■■□□ 2.29
KLHL40-201ENST00000287777 WRNQ14191 1432 aaPredicted RBP eCLIP29.32■■■□□ 2.28
KLHL40-201ENST00000287777 RUSC2Q8N2Y8 1516 aa29.24■■■□□ 2.27
KLHL40-201ENST00000287777 SYNJ1O43426 1573 aa29.22■■■□□ 2.27
KLHL40-201ENST00000287777 CSRNP3Q8WYN3 585 aa29.18■■■□□ 2.26
KLHL40-201ENST00000287777 TNIKQ9UKE5 1360 aa29.17■■■□□ 2.26
KLHL40-201ENST00000287777 CEP162Q5TB80 1403 aa29.16■■■□□ 2.26
KLHL40-201ENST00000287777 ZEB1P37275 1124 aaPredicted RBP29.12■■■□□ 2.25
KLHL40-201ENST00000287777 GOLGA3Q08378 1498 aa29.08■■■□□ 2.25
KLHL40-201ENST00000287777 HMGXB3Q12766 1538 aa29.07■■■□□ 2.24
KLHL40-201ENST00000287777 NCAPD3P42695 1498 aa29.01■■■□□ 2.23
KLHL40-201ENST00000287777 KIF21BO75037 1637 aa28.99■■■□□ 2.23
KLHL40-201ENST00000287777 UBTFP17480 764 aaKnown RBP28.96■■■□□ 2.23
KLHL40-201ENST00000287777 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.23
KLHL40-201ENST00000287777 TOP2BQ02880 1626 aa28.95■■■□□ 2.22
KLHL40-201ENST00000287777 BIVM-ERCC5R4GMW8 1640 aa28.89■■■□□ 2.22
KLHL40-201ENST00000287777 RAPGEF2Q9Y4G8 1499 aa28.71■■■□□ 2.19
KLHL40-201ENST00000287777 CFTRP13569 1480 aa28.69■■■□□ 2.18
KLHL40-201ENST00000287777 CLIP1P30622 1438 aa28.68■■■□□ 2.18
KLHL40-201ENST00000287777 TTBK1Q5TCY1 1321 aaPredicted RBP28.67■■■□□ 2.18
KLHL40-201ENST00000287777 CUX1P39880 1505 aa28.67■■■□□ 2.18
KLHL40-201ENST00000287777 PRDM2Q13029 1718 aa28.62■■■□□ 2.17
KLHL40-201ENST00000287777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.61■■■□□ 2.17
KLHL40-201ENST00000287777 ERICH3Q5RHP9 1530 aa28.57■■■□□ 2.16
KLHL40-201ENST00000287777 VPS8Q8N3P4 1428 aa28.56■■■□□ 2.16
KLHL40-201ENST00000287777 CCER1Q8TC90 406 aaPredicted RBP28.55■■■□□ 2.16
KLHL40-201ENST00000287777 PRXQ9BXM0 1461 aa28.53■■■□□ 2.16
KLHL40-201ENST00000287777 KIF27Q86VH2 1401 aa28.45■■■□□ 2.14
KLHL40-201ENST00000287777 CC2D2AQ9P2K1 1620 aa28.41■■■□□ 2.14
KLHL40-201ENST00000287777 CADPSQ9ULU8 1353 aa28.38■■■□□ 2.13
KLHL40-201ENST00000287777 RANGAP1P46060 587 aaPredicted RBP28.33■■■□□ 2.13
KLHL40-201ENST00000287777 ARAP1Q96P48 1450 aa28.29■■■□□ 2.12
KLHL40-201ENST00000287777 APLP2Q06481 763 aa28.29■■■□□ 2.12
KLHL40-201ENST00000287777 CUX2O14529 1486 aa28.2■■■□□ 2.11
KLHL40-201ENST00000287777 FGD5Q6ZNL6 1462 aa28.18■■■□□ 2.1
KLHL40-201ENST00000287777 FANCD2Q9BXW9 1451 aa28.12■■■□□ 2.09
KLHL40-201ENST00000287777 IGF1RP08069 1367 aa28.12■■■□□ 2.09
KLHL40-201ENST00000287777 HNRNPUL2Q1KMD3 747 aaKnown RBP28.12■■■□□ 2.09
KLHL40-201ENST00000287777 ARHGAP35Q9NRY4 1499 aa28.09■■■□□ 2.09
KLHL40-201ENST00000287777 DNMBPQ6XZF7 1577 aa28.03■■■□□ 2.08
KLHL40-201ENST00000287777 CARMIL1Q5VZK9 1371 aa28■■■□□ 2.07
KLHL40-201ENST00000287777 KANK4Q5T7N3 995 aaPredicted RBP27.96■■■□□ 2.07
KLHL40-201ENST00000287777 NESP48681 1621 aa27.94■■■□□ 2.06
KLHL40-201ENST00000287777 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
KLHL40-201ENST00000287777 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
KLHL40-201ENST00000287777 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.05
KLHL40-201ENST00000287777 RAD54L2Q9Y4B4 1467 aa27.87■■■□□ 2.05
KLHL40-201ENST00000287777 RRBP1Q9P2E9 1410 aaKnown RBP27.87■■■□□ 2.05
KLHL40-201ENST00000287777 LAMC3Q9Y6N6 1575 aa27.87■■■□□ 2.05
KLHL40-201ENST00000287777 DIEXFQ68CQ4 756 aaKnown RBP27.84■■■□□ 2.05
KLHL40-201ENST00000287777 MAP3K1Q13233 1512 aa27.79■■■□□ 2.04
KLHL40-201ENST00000287777 TIAM1Q13009 1591 aa27.79■■■□□ 2.04
KLHL40-201ENST00000287777 CUL7Q14999 1698 aa27.77■■■□□ 2.04
KLHL40-201ENST00000287777 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
KLHL40-201ENST00000287777 ZNF316A6NFI3 1004 aaPredicted RBP27.76■■■□□ 2.03
KLHL40-201ENST00000287777 URB2Q14146 1524 aaKnown RBP27.74■■■□□ 2.03
KLHL40-201ENST00000287777 CCNB3Q8WWL7 1395 aa27.71■■■□□ 2.03
KLHL40-201ENST00000287777 FHAD1B1AJZ9 1412 aa27.69■■■□□ 2.02
KLHL40-201ENST00000287777 CTTNBP2Q8WZ74 1663 aa27.68■■■□□ 2.02
KLHL40-201ENST00000287777 DHX57Q6P158 1386 aaKnown RBP27.68■■■□□ 2.02
KLHL40-201ENST00000287777 CLSPNQ9HAW4 1339 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms