RNA–Protein interactions for RNA: ENST00000268220.11

SEC11A-201, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC11A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-201ENST00000268220 NISCHQ9Y2I1 1504 aa48.37■■■■■ 5.33
SEC11A-201ENST00000268220 CCDC180Q9P1Z9 1646 aa43.12■■■■■ 4.49
SEC11A-201ENST00000268220 ABCC9O60706 1549 aa42.65■■■■■ 4.42
SEC11A-201ENST00000268220 RB1CC1Q8TDY2 1594 aa40.84■■■■■ 4.13
SEC11A-201ENST00000268220 DCAF8L2P0C7V8 631 aa40.75■■■■■ 4.11
SEC11A-201ENST00000268220 NACADO15069 1562 aa40.69■■■■■ 4.1
SEC11A-201ENST00000268220 MYO15BQ96JP2 1530 aa40.3■■■■■ 4.04
SEC11A-201ENST00000268220 ZCCHC6Q5VYS8 1495 aaKnown RBP40.18■■■■■ 4.02
SEC11A-201ENST00000268220 DCAF1Q9Y4B6 1507 aa39.97■■■■□ 3.99
SEC11A-201ENST00000268220 PABPN1Q86U42 306 aaKnown RBP eCLIP39.84■■■■□ 3.97
SEC11A-201ENST00000268220 UNC13AQ9UPW8 1703 aa39.79■■■■□ 3.96
SEC11A-201ENST00000268220 BICRAQ9NZM4 1560 aa39.55■■■■□ 3.92
SEC11A-201ENST00000268220 DNAJC5BQ9UF47 199 aa39.5■■■■□ 3.91
SEC11A-201ENST00000268220 SCRIBQ14160 1630 aa39.35■■■■□ 3.89
SEC11A-201ENST00000268220 SHROOM4Q9ULL8 1493 aa39.14■■■■□ 3.86
SEC11A-201ENST00000268220 EIF4G1Q04637 1599 aaKnown RBP38.57■■■■□ 3.77
SEC11A-201ENST00000268220 CC2D2AQ9P2K1 1620 aa38.52■■■■□ 3.76
SEC11A-201ENST00000268220 CECR2Q9BXF3 1484 aa38.37■■■■□ 3.73
SEC11A-201ENST00000268220 SMARCA4P51532 1647 aa37.58■■■■□ 3.61
SEC11A-201ENST00000268220 NCAPD3P42695 1498 aa37.56■■■■□ 3.6
SEC11A-201ENST00000268220 BAZ1AQ9NRL2 1556 aaPredicted RBP37.53■■■■□ 3.6
SEC11A-201ENST00000268220 ATAD2BQ9ULI0 1458 aa37.52■■■■□ 3.6
SEC11A-201ENST00000268220 SMARCA2P51531 1590 aa37.47■■■■□ 3.59
SEC11A-201ENST00000268220 HMGXB3Q12766 1538 aa37.3■■■■□ 3.56
SEC11A-201ENST00000268220 MROH2BQ7Z745 1585 aa37.26■■■■□ 3.55
SEC11A-201ENST00000268220 BAZ1BQ9UIG0 1483 aaKnown RBP37.21■■■■□ 3.55
SEC11A-201ENST00000268220 PEG3Q9GZU2 1588 aa37.21■■■■□ 3.55
SEC11A-201ENST00000268220 ERCC6Q03468 1493 aa36.83■■■■□ 3.49
SEC11A-201ENST00000268220 WIZO95785 1651 aa36.82■■■■□ 3.49
SEC11A-201ENST00000268220 NESP48681 1621 aa36.76■■■■□ 3.48
SEC11A-201ENST00000268220 RSF1Q96T23 1441 aaPredicted RBP36.72■■■■□ 3.47
SEC11A-201ENST00000268220 LAMC3Q9Y6N6 1575 aa36.61■■■■□ 3.45
SEC11A-201ENST00000268220 CUX2O14529 1486 aa36.53■■■■□ 3.44
SEC11A-201ENST00000268220 CADPSQ9ULU8 1353 aa36.48■■■■□ 3.43
SEC11A-201ENST00000268220 PDS5BQ9NTI5 1447 aa36.45■■■■□ 3.43
SEC11A-201ENST00000268220 TOP2AP11388 1531 aaKnown RBP36.42■■■■□ 3.42
SEC11A-201ENST00000268220 KIF21AQ7Z4S6 1674 aa36.27■■■■□ 3.4
SEC11A-201ENST00000268220 THOC2Q8NI27 1593 aaKnown RBP36.23■■■■□ 3.39
SEC11A-201ENST00000268220 CFTRP13569 1480 aa36.14■■■■□ 3.38
SEC11A-201ENST00000268220 SUPT5HO00267 1087 aaKnown RBP36.09■■■■□ 3.37
SEC11A-201ENST00000268220 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
SEC11A-201ENST00000268220 FANCD2Q9BXW9 1451 aa36.04■■■■□ 3.36
SEC11A-201ENST00000268220 CEP164Q9UPV0 1460 aa36.04■■■■□ 3.36
SEC11A-201ENST00000268220 CCDC88BA6NC98 1476 aa36.03■■■■□ 3.36
SEC11A-201ENST00000268220 DNAJC5Q9H3Z4 198 aa35.93■■■■□ 3.34
SEC11A-201ENST00000268220 WDR62O43379 1518 aa35.91■■■■□ 3.34
SEC11A-201ENST00000268220 PRDM2Q13029 1718 aa35.74■■■■□ 3.31
SEC11A-201ENST00000268220 URB2Q14146 1524 aaKnown RBP35.67■■■■□ 3.3
SEC11A-201ENST00000268220 ABCC8Q09428 1581 aa35.43■■■■□ 3.26
SEC11A-201ENST00000268220 TOPBP1Q92547 1522 aa35.4■■■■□ 3.26
SEC11A-201ENST00000268220 DNMBPQ6XZF7 1577 aa35.31■■■■□ 3.24
SEC11A-201ENST00000268220 IFT140Q96RY7 1462 aa35.29■■■■□ 3.24
SEC11A-201ENST00000268220 ZNF608Q9ULD9 1512 aaPredicted RBP35.14■■■■□ 3.22
SEC11A-201ENST00000268220 POLA1P09884 1462 aaPredicted RBP35.07■■■■□ 3.2
SEC11A-201ENST00000268220 OSCARQ8IYS5 282 aa35.05■■■■□ 3.2
SEC11A-201ENST00000268220 TARBP1Q13395 1621 aaKnown RBP35■■■■□ 3.19
SEC11A-201ENST00000268220 SOGA1O94964 1423 aa34.99■■■■□ 3.19
SEC11A-201ENST00000268220 CUX1P39880 1505 aa34.97■■■■□ 3.19
SEC11A-201ENST00000268220 EIF4G3O43432 1585 aaKnown RBP34.96■■■■□ 3.19
SEC11A-201ENST00000268220 AQRO60306 1485 aaKnown RBP eCLIP34.94■■■■□ 3.18
SEC11A-201ENST00000268220 FGD5Q6ZNL6 1462 aa34.94■■■■□ 3.18
SEC11A-201ENST00000268220 RAD54L2Q9Y4B4 1467 aa34.94■■■■□ 3.18
SEC11A-201ENST00000268220 TDRD9Q8NDG6 1382 aaKnown RBP34.83■■■■□ 3.17
SEC11A-201ENST00000268220 WDR97A6NE52 1622 aa34.72■■■■□ 3.15
SEC11A-201ENST00000268220 FBLN2P98095 1184 aa34.7■■■■□ 3.15
SEC11A-201ENST00000268220 CHIC1Q5VXU3 224 aa34.68■■■■□ 3.14
SEC11A-201ENST00000268220 WRNQ14191 1432 aaPredicted RBP eCLIP34.66■■■■□ 3.14
SEC11A-201ENST00000268220 TRIM41Q8WV44 630 aa34.62■■■■□ 3.13
SEC11A-201ENST00000268220 GRIN2BQ13224 1484 aa34.6■■■■□ 3.13
SEC11A-201ENST00000268220 CHD1O14646 1710 aa34.58■■■■□ 3.13
SEC11A-201ENST00000268220 SNAPC4Q5SXM2 1469 aa34.58■■■■□ 3.13
SEC11A-201ENST00000268220 ABCA10Q8WWZ4 1543 aa34.58■■■■□ 3.13
SEC11A-201ENST00000268220 TOP2BQ02880 1626 aa34.57■■■■□ 3.12
SEC11A-201ENST00000268220 GAPVD1Q14C86 1478 aa34.55■■■■□ 3.12
SEC11A-201ENST00000268220 BIVM-ERCC5R4GMW8 1640 aa34.54■■■■□ 3.12
SEC11A-201ENST00000268220 MAGI1Q96QZ7 1491 aaPredicted RBP34.53■■■■□ 3.12
SEC11A-201ENST00000268220 CHMP7Q8WUX9 453 aaPredicted RBP34.53■■■■□ 3.12
SEC11A-201ENST00000268220 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
SEC11A-201ENST00000268220 ABCA5Q8WWZ7 1642 aa34.43■■■■□ 3.1
SEC11A-201ENST00000268220 PBRM1Q86U86 1689 aa34.41■■■■□ 3.1
SEC11A-201ENST00000268220 SYNJ2O15056 1496 aa34.41■■■■□ 3.1
SEC11A-201ENST00000268220 RIMBP3CA6NJZ7 1639 aa34.4■■■■□ 3.1
SEC11A-201ENST00000268220 RIMBP3BA6NNM3 1639 aa34.4■■■■□ 3.1
SEC11A-201ENST00000268220 RIMBP3Q9UFD9 1639 aa34.4■■■■□ 3.1
SEC11A-201ENST00000268220 ARHGEF11O15085 1522 aa34.37■■■■□ 3.09
SEC11A-201ENST00000268220 CLASP1Q7Z460 1538 aa34.21■■■■□ 3.07
SEC11A-201ENST00000268220 CYB5RLQ6IPT4 315 aa34.19■■■■□ 3.06
SEC11A-201ENST00000268220 ERICH3Q5RHP9 1530 aa34.16■■■■□ 3.06
SEC11A-201ENST00000268220 FHAD1B1AJZ9 1412 aa34.14■■■■□ 3.06
SEC11A-201ENST00000268220 ADAMTS12P58397 1594 aa34.13■■■■□ 3.05
SEC11A-201ENST00000268220 GRIN2AQ12879 1464 aa34.13■■■■□ 3.05
SEC11A-201ENST00000268220 ARAP1Q96P48 1450 aa34.06■■■■□ 3.04
SEC11A-201ENST00000268220 KIF27Q86VH2 1401 aa33.99■■■■□ 3.03
SEC11A-201ENST00000268220 NUP160Q12769 1436 aa33.98■■■■□ 3.03
SEC11A-201ENST00000268220 CEP170Q5SW79 1584 aa33.93■■■■□ 3.02
SEC11A-201ENST00000268220 IGF1RP08069 1367 aa33.89■■■■□ 3.02
SEC11A-201ENST00000268220 CUL7Q14999 1698 aa33.76■■■□□ 2.99
SEC11A-201ENST00000268220 JPH4Q96JJ6 628 aa33.73■■■□□ 2.99
SEC11A-201ENST00000268220 SHROOM2Q13796 1616 aa33.72■■■□□ 2.99
SEC11A-201ENST00000268220 ERCC6L2Q5T890 1561 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms