RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
CDH11-201ENST00000268603 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
CDH11-201ENST00000268603 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
CDH11-201ENST00000268603 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
CDH11-201ENST00000268603 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
CDH11-201ENST00000268603 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
CDH11-201ENST00000268603 APLP2Q06481 763 aa19.84■□□□□ 0.77
CDH11-201ENST00000268603 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
CDH11-201ENST00000268603 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
CDH11-201ENST00000268603 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
CDH11-201ENST00000268603 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
CDH11-201ENST00000268603 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
CDH11-201ENST00000268603 RANGAP1P46060 587 aaPredicted RBP19.36■□□□□ 0.69
CDH11-201ENST00000268603 MYT1Q01538 1121 aa19.33■□□□□ 0.69
CDH11-201ENST00000268603 CENPBP07199 599 aaPredicted RBP19.11■□□□□ 0.65
CDH11-201ENST00000268603 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
CDH11-201ENST00000268603 NEFLP07196 543 aa19.02■□□□□ 0.64
CDH11-201ENST00000268603 MYT1LQ9UL68 1186 aa19.02■□□□□ 0.64
CDH11-201ENST00000268603 DAXXQ9UER7 740 aaPredicted RBP18.94■□□□□ 0.62
CDH11-201ENST00000268603 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
CDH11-201ENST00000268603 YTHDC1Q96MU7 727 aaKnown RBP18.82■□□□□ 0.6
CDH11-201ENST00000268603 POLR3GLQ9BT43 218 aa18.79■□□□□ 0.6
CDH11-201ENST00000268603 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
CDH11-201ENST00000268603 CNGB1Q14028 1251 aaPredicted RBP18.64■□□□□ 0.57
CDH11-201ENST00000268603 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
CDH11-201ENST00000268603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
CDH11-201ENST00000268603 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
CDH11-201ENST00000268603 ZEB1P37275 1124 aaPredicted RBP18.49■□□□□ 0.55
CDH11-201ENST00000268603 CLSPNQ9HAW4 1339 aa18.42■□□□□ 0.54
CDH11-201ENST00000268603 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
CDH11-201ENST00000268603 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
CDH11-201ENST00000268603 ITGAEP38570 1179 aa18.34■□□□□ 0.53
CDH11-201ENST00000268603 RTL5Q5HYW3 569 aaPredicted RBP18.29■□□□□ 0.52
CDH11-201ENST00000268603 PPARGC1BQ86YN6 1023 aaKnown RBP18.28■□□□□ 0.52
CDH11-201ENST00000268603 SLC24A1O60721 1099 aa18.27■□□□□ 0.51
CDH11-201ENST00000268603 BCL11AQ9H165 835 aa18.19■□□□□ 0.5
CDH11-201ENST00000268603 ZBTB47Q9UFB7 747 aaPredicted RBP18.12■□□□□ 0.49
CDH11-201ENST00000268603 BCANQ96GW7 911 aa17.97■□□□□ 0.47
CDH11-201ENST00000268603 CANXP27824 592 aaKnown RBP17.79■□□□□ 0.44
CDH11-201ENST00000268603 TRIM52Q96A61 297 aa17.76■□□□□ 0.43
CDH11-201ENST00000268603 NEFMP07197 916 aa17.73■□□□□ 0.43
CDH11-201ENST00000268603 ZNF326Q5BKZ1 582 aaKnown RBP17.71■□□□□ 0.43
CDH11-201ENST00000268603 PLPPR3Q6T4P5 718 aa17.69■□□□□ 0.42
CDH11-201ENST00000268603 FAM50AQ14320 339 aaKnown RBP17.66■□□□□ 0.42
CDH11-201ENST00000268603 EIF5BO60841 1220 aaKnown RBP17.59■□□□□ 0.41
CDH11-201ENST00000268603 NEUROD1Q13562 356 aa17.57■□□□□ 0.4
CDH11-201ENST00000268603 HRCP23327 699 aa17.54■□□□□ 0.4
CDH11-201ENST00000268603 TRIM26Q12899 539 aaPredicted RBP17.53■□□□□ 0.4
CDH11-201ENST00000268603 A0A0G2JS52 829 aa17.51■□□□□ 0.39
CDH11-201ENST00000268603 CDK11AQ9UQ88 783 aaPredicted RBP17.51■□□□□ 0.39
CDH11-201ENST00000268603 CDK11BP21127 795 aaKnown RBP17.51■□□□□ 0.39
CDH11-201ENST00000268603 FBLN2P98095 1184 aa17.51■□□□□ 0.39
CDH11-201ENST00000268603 ANP32BQ92688 251 aaKnown RBP17.48■□□□□ 0.39
CDH11-201ENST00000268603 ESF1Q9H501 851 aaKnown RBP17.48■□□□□ 0.39
CDH11-201ENST00000268603 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
CDH11-201ENST00000268603 HSP90AA1P07900 732 aaKnown RBP17.43■□□□□ 0.38
CDH11-201ENST00000268603 GLIPR1L2Q4G1C9 344 aa17.4■□□□□ 0.38
CDH11-201ENST00000268603 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
CDH11-201ENST00000268603 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
CDH11-201ENST00000268603 ANP32CO43423 234 aa17.36■□□□□ 0.37
CDH11-201ENST00000268603 TULP1O00294 542 aaPredicted RBP17.32■□□□□ 0.36
CDH11-201ENST00000268603 ANP32AP39687 249 aaKnown RBP17.31■□□□□ 0.36
CDH11-201ENST00000268603 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
CDH11-201ENST00000268603 LOC105371045A0A1W2PR82 267 aa17.3■□□□□ 0.36
CDH11-201ENST00000268603 CHGAP10645 457 aaKnown RBP17.28■□□□□ 0.36
CDH11-201ENST00000268603 ARID3CA6NKF2 412 aa17.25■□□□□ 0.35
CDH11-201ENST00000268603 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
CDH11-201ENST00000268603 ZBTB7CA1YPR0 619 aa17.19■□□□□ 0.34
CDH11-201ENST00000268603 ARXQ96QS3 562 aa17.18■□□□□ 0.34
CDH11-201ENST00000268603 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
CDH11-201ENST00000268603 ZNF777Q9ULD5 760 aaPredicted RBP17.16■□□□□ 0.34
CDH11-201ENST00000268603 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
CDH11-201ENST00000268603 GTF3C3Q9Y5Q9 886 aa17.14■□□□□ 0.33
CDH11-201ENST00000268603 C14orf37Q86TY3 774 aa17.03■□□□□ 0.32
CDH11-201ENST00000268603 SALL2Q9Y467 1007 aaPredicted RBP17.02■□□□□ 0.32
CDH11-201ENST00000268603 HAP1P54257 671 aaPredicted RBP16.99■□□□□ 0.31
CDH11-201ENST00000268603 P3H3Q8IVL6 736 aa16.98■□□□□ 0.31
CDH11-201ENST00000268603 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
CDH11-201ENST00000268603 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.3
CDH11-201ENST00000268603 NPHP1O15259 732 aa16.92■□□□□ 0.3
CDH11-201ENST00000268603 NBR1Q14596 966 aa16.92■□□□□ 0.3
CDH11-201ENST00000268603 TAOK2Q9UL54 1235 aa16.9■□□□□ 0.3
CDH11-201ENST00000268603 MYH16Q9H6N6 1097 aa16.9■□□□□ 0.3
CDH11-201ENST00000268603 TPRNQ4KMQ1 711 aa16.89■□□□□ 0.29
CDH11-201ENST00000268603 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
CDH11-201ENST00000268603 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
CDH11-201ENST00000268603 CLSTN1O94985 981 aa16.86■□□□□ 0.29
CDH11-201ENST00000268603 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
CDH11-201ENST00000268603 NCLP19338 710 aaKnown RBP16.85■□□□□ 0.29
CDH11-201ENST00000268603 ZRSR1Q15695 479 aaKnown RBP16.84■□□□□ 0.29
CDH11-201ENST00000268603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDH11-201ENST00000268603 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
CDH11-201ENST00000268603 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDH11-201ENST00000268603 TRIM44Q96DX7 344 aaPredicted RBP16.76■□□□□ 0.27
CDH11-201ENST00000268603 FKBP8Q14318 412 aa16.75■□□□□ 0.27
CDH11-201ENST00000268603 PRM3Q9NNZ6 103 aa16.73■□□□□ 0.27
CDH11-201ENST00000268603 PPP1R15AO75807 674 aaPredicted RBP16.72■□□□□ 0.27
CDH11-201ENST00000268603 HNRNPUQ00839 825 aaKnown RBP eCLIP16.71■□□□□ 0.26
CDH11-201ENST00000268603 PTMAP06454 111 aaKnown RBP16.7■□□□□ 0.26
CDH11-201ENST00000268603 DNTTIP2Q5QJE6 756 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms