Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2-28A0A075B6P5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 AL355472.2-201ENST00000422958 438 ntBASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 CNN2P6-201ENST00000439038 900 ntBASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 DUX4L16-201ENST00000555130 1264 ntBASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 CROCCP1-201ENST00000426910 5675 ntBASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 ESPNP-201ENST00000270691 2015 ntBASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2-28A0A075B6P5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 CYP2T3P-201ENST00000601990 817 ntBASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 BID-214ENST00000617586 542 ntTSL 5 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.49□□□□□ -0.41
IGKV2-28A0A075B6P5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IGKV2-28A0A075B6P5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms