Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLSTN1O94985 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLSTN1O94985 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CLSTN1O94985 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.94■□□□□ 0.94
CLSTN1O94985 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.94■□□□□ 0.94
CLSTN1O94985 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.94■□□□□ 0.94
CLSTN1O94985 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.94■□□□□ 0.94
CLSTN1O94985 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLSTN1O94985 AP006294.2-201ENST00000641667 209 ntBASIC20.94■□□□□ 0.94
CLSTN1O94985 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLSTN1O94985 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.94■□□□□ 0.94
CLSTN1O94985 TREX1-205ENST00000625293 1783 ntBASIC20.94■□□□□ 0.94
CLSTN1O94985 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLSTN1O94985 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.94■□□□□ 0.94
CLSTN1O94985 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLSTN1O94985 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLSTN1O94985 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLSTN1O94985 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLSTN1O94985 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.93■□□□□ 0.94
CLSTN1O94985 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.93■□□□□ 0.94
CLSTN1O94985 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLSTN1O94985 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CLSTN1O94985 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.93■□□□□ 0.94
CLSTN1O94985 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLSTN1O94985 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLSTN1O94985 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CLSTN1O94985 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.93■□□□□ 0.94
CLSTN1O94985 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLSTN1O94985 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.93■□□□□ 0.94
CLSTN1O94985 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.93■□□□□ 0.94
CLSTN1O94985 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.93■□□□□ 0.94
CLSTN1O94985 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.93■□□□□ 0.94
CLSTN1O94985 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLSTN1O94985 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.93■□□□□ 0.94
CLSTN1O94985 C1QL1P1-201ENST00000568105 661 ntBASIC20.93■□□□□ 0.94
CLSTN1O94985 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLSTN1O94985 LINC01465-201ENST00000408887 1940 ntBASIC20.93■□□□□ 0.94
CLSTN1O94985 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLSTN1O94985 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLSTN1O94985 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLSTN1O94985 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLSTN1O94985 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.92■□□□□ 0.94
CLSTN1O94985 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CLSTN1O94985 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CLSTN1O94985 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CLSTN1O94985 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CLSTN1O94985 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.92■□□□□ 0.94
CLSTN1O94985 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.92■□□□□ 0.94
CLSTN1O94985 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.92■□□□□ 0.94
CLSTN1O94985 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.92■□□□□ 0.94
CLSTN1O94985 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.92■□□□□ 0.94
CLSTN1O94985 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.92■□□□□ 0.94
CLSTN1O94985 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLSTN1O94985 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLSTN1O94985 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.92■□□□□ 0.94
CLSTN1O94985 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLSTN1O94985 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.92■□□□□ 0.94
CLSTN1O94985 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLSTN1O94985 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLSTN1O94985 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLSTN1O94985 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLSTN1O94985 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CLSTN1O94985 AL353807.1-201ENST00000427475 662 ntBASIC20.91■□□□□ 0.94
CLSTN1O94985 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLSTN1O94985 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLSTN1O94985 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.91■□□□□ 0.94
CLSTN1O94985 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLSTN1O94985 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.91■□□□□ 0.94
CLSTN1O94985 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLSTN1O94985 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLSTN1O94985 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.91■□□□□ 0.94
CLSTN1O94985 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.91■□□□□ 0.94
CLSTN1O94985 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLSTN1O94985 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLSTN1O94985 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CLSTN1O94985 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.9■□□□□ 0.94
CLSTN1O94985 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.9■□□□□ 0.94
CLSTN1O94985 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CLSTN1O94985 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.9■□□□□ 0.94
CLSTN1O94985 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms