Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 AC083906.6-201ENST00000641366 219 ntBASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.66■□□□□ 0.58
VTI1BQ9UEU0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 AC090340.1-201ENST00000620778 4980 ntBASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 KRT17P3-201ENST00000420566 1262 ntBASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.65■□□□□ 0.58
VTI1BQ9UEU0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VTI1BQ9UEU0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
VTI1BQ9UEU0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VTI1BQ9UEU0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.64■□□□□ 0.58
VTI1BQ9UEU0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VTI1BQ9UEU0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
VTI1BQ9UEU0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 ANO7L1-203ENST00000602586 1720 ntBASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 NOC2LP1-202ENST00000452600 2235 ntBASIC18.64■□□□□ 0.57
VTI1BQ9UEU0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 ABHD17AP1-201ENST00000358206 933 ntBASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VTI1BQ9UEU0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 RPS2P52-201ENST00000469610 820 ntBASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms