Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC28Q86X40 FP475955.4-201ENST00000623131 1990 ntBASIC16.88■□□□□ 0.29
LRRC28Q86X40 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC28Q86X40 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 FZD10-202ENST00000539839 3282 ntBASIC16.87■□□□□ 0.29
LRRC28Q86X40 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 AC023632.3-201ENST00000521633 145 ntBASIC16.87■□□□□ 0.29
LRRC28Q86X40 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 SOX15-203ENST00000570788 1093 ntBASIC16.87■□□□□ 0.29
LRRC28Q86X40 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 AC006058.3-201ENST00000606217 1069 ntBASIC16.87■□□□□ 0.29
LRRC28Q86X40 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 PHGDH-210ENST00000641115 1638 ntBASIC16.87■□□□□ 0.29
LRRC28Q86X40 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRRC28Q86X40 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRC28Q86X40 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.86■□□□□ 0.29
LRRC28Q86X40 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC28Q86X40 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LRRC28Q86X40 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
LRRC28Q86X40 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LRRC28Q86X40 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRC28Q86X40 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
LRRC28Q86X40 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRC28Q86X40 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.86■□□□□ 0.29
LRRC28Q86X40 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRC28Q86X40 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LRRC28Q86X40 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRC28Q86X40 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
LRRC28Q86X40 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 KRT17P3-201ENST00000420566 1262 ntBASIC16.85■□□□□ 0.29
LRRC28Q86X40 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LRRC28Q86X40 AC128676.1-201ENST00000454392 318 ntBASIC16.85■□□□□ 0.29
LRRC28Q86X40 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRC28Q86X40 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms