Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.881e-10■□□□□ 10.4
LSM11P83369 ZNF444-204ENST00000587236 5565 ntTSL 213.98□□□□□ -0.171e-10■□□□□ 10.4
LSM11P83369 PCYT2-212ENST00000572995 804 ntTSL 313.78□□□□□ -0.29e-9■□□□□ 10.4
LSM11P83369 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.53e-8■□□□□ 10.4
LSM11P83369 MAPK8IP3-211ENST00000567352 507 ntTSL 212.27□□□□□ -0.451e-6■□□□□ 10.4
LSM11P83369 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.271e-8■□□□□ 10.4
LSM11P83369 VARS-221ENST00000463184 619 ntTSL 217.34■□□□□ 0.371e-6■□□□□ 10.4
LSM11P83369 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)26.43■■□□□ 1.822e-28■□□□□ 10.3
LSM11P83369 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.346e-9■□□□□ 10.3
LSM11P83369 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.276e-9■□□□□ 10.3
LSM11P83369 DUS1L-204ENST00000542088 1040 ntTSL 315.79■□□□□ 0.126e-9■□□□□ 10.3
LSM11P83369 DUS1L-203ENST00000538833 1250 ntTSL 1 (best)15.17■□□□□ 0.026e-9■□□□□ 10.3
LSM11P83369 DUS1L-210ENST00000578846 4456 ntTSL 212.85□□□□□ -0.356e-9■□□□□ 10.3
LSM11P83369 DUS1L-205ENST00000577574 473 ntTSL 512.66□□□□□ -0.386e-9■□□□□ 10.3
LSM11P83369 DUS1L-212ENST00000579854 657 ntTSL 212.25□□□□□ -0.456e-9■□□□□ 10.3
LSM11P83369 DUS1L-216ENST00000584871 676 ntTSL 211.58□□□□□ -0.566e-9■□□□□ 10.3
LSM11P83369 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.1□□□□□ -0.155e-7■□□□□ 10.3
LSM11P83369 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.46□□□□□ -0.252e-11■□□□□ 10.3
LSM11P83369 UBR4-206ENST00000419533 5583 ntTSL 57.29□□□□□ -1.245e-7■□□□□ 10.3
LSM11P83369 C2orf42-212ENST00000470096 579 ntTSL 414.21□□□□□ -0.132e-6■□□□□ 10.3
LSM11P83369 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.832e-6■□□□□ 10.3
LSM11P83369 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC9.86□□□□□ -0.832e-6■□□□□ 10.3
LSM11P83369 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.99□□□□□ -1.292e-6■□□□□ 10.3
LSM11P83369 PHF1-209ENST00000487667 1930 ntTSL 518.71■□□□□ 0.596e-8■□□□□ 10.3
LSM11P83369 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.02■□□□□ 0.326e-8■□□□□ 10.3
LSM11P83369 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.81■□□□□ 0.284e-10■□□□□ 10.3
LSM11P83369 ARHGAP33-208ENST00000588248 2004 ntTSL 516.66■□□□□ 0.266e-10■□□□□ 10.3
LSM11P83369 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.176e-10■□□□□ 10.3
LSM11P83369 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.146e-8■□□□□ 10.3
LSM11P83369 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.87■□□□□ 0.136e-8■□□□□ 10.3
LSM11P83369 HGD-210ENST00000494453 683 ntTSL 314.59□□□□□ -0.071e-8■□□□□ 10.3
LSM11P83369 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.086e-8■□□□□ 10.3
LSM11P83369 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.31□□□□□ -0.121e-6■□□□□ 10.3
LSM11P83369 PHF1-211ENST00000495509 1752 ntTSL 214.3□□□□□ -0.126e-8■□□□□ 10.3
LSM11P83369 ELP5-205ENST00000570322 1083 ntTSL 314.3□□□□□ -0.126e-8■□□□□ 10.3
LSM11P83369 ARHGAP33-206ENST00000587447 2983 ntTSL 1 (best)13.83□□□□□ -0.196e-10■□□□□ 10.3
LSM11P83369 HGD-204ENST00000475447 565 ntTSL 313.71□□□□□ -0.211e-8■□□□□ 10.3
LSM11P83369 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.426e-8■□□□□ 10.3
LSM11P83369 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.446e-10■□□□□ 10.3
LSM11P83369 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.446e-10■□□□□ 10.3
LSM11P83369 SELENOP-214ENST00000514985 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.733e-22■□□□□ 10.3
LSM11P83369 CLASRP-216ENST00000592876 751 ntTSL 310.36□□□□□ -0.754e-10■□□□□ 10.3
LSM11P83369 SELENOP-210ENST00000512980 4175 ntTSL 26.59□□□□□ -1.353e-22■□□□□ 10.3
LSM11P83369 UBR4-215ENST00000492606 314 ntTSL 36.07□□□□□ -1.446e-8■□□□□ 10.3
LSM11P83369 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.51■□□□□ 0.393e-7■□□□□ 10.3
LSM11P83369 AC008443.1-204ENST00000417281 629 ntTSL 3 BASIC13.01□□□□□ -0.333e-7■□□□□ 10.3
LSM11P83369 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.43□□□□□ -0.423e-7■□□□□ 10.3
LSM11P83369 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC11.5□□□□□ -0.573e-7■□□□□ 10.3
LSM11P83369 SPG7-203ENST00000561702 2042 ntTSL 213.3□□□□□ -0.285e-8■□□□□ 10.3
LSM11P83369 SPG7-212ENST00000565891 878 ntTSL 212.96□□□□□ -0.335e-8■□□□□ 10.3
LSM11P83369 SPG7-221ENST00000569720 909 ntTSL 211.45□□□□□ -0.585e-8■□□□□ 10.3
LSM11P83369 SPG7-222ENST00000569820 2305 ntTSL 511.05□□□□□ -0.645e-8■□□□□ 10.3
LSM11P83369 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.323e-6■□□□□ 10.3
LSM11P83369 SREBF1-204ENST00000395756 3026 ntTSL 216.91■□□□□ 0.31e-8■□□□□ 10.3
LSM11P83369 LTBP4-212ENST00000595118 2446 ntTSL 216.47■□□□□ 0.233e-6■□□□□ 10.3
LSM11P83369 LTBP4-204ENST00000318809 1700 ntTSL 215.85■□□□□ 0.133e-6■□□□□ 10.3
LSM11P83369 SREBF1-213ENST00000485080 1230 ntTSL 515.63■□□□□ 0.091e-8■□□□□ 10.3
LSM11P83369 SREBF1-218ENST00000578469 588 ntTSL 315.54■□□□□ 0.081e-8■□□□□ 10.3
LSM11P83369 SREBF1-203ENST00000395751 4653 ntTSL 215.28■□□□□ 0.041e-8■□□□□ 10.3
LSM11P83369 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.021e-8■□□□□ 10.3
LSM11P83369 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.211e-8■□□□□ 10.3
LSM11P83369 LTBP4-220ENST00000598166 699 ntTSL 513.56□□□□□ -0.243e-6■□□□□ 10.3
LSM11P83369 LTBP4-202ENST00000243562 3140 ntTSL 213.43□□□□□ -0.263e-6■□□□□ 10.3
LSM11P83369 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.311e-8■□□□□ 10.3
LSM11P83369 EXOC3L4-207ENST00000560925 2341 ntTSL 222.31■■□□□ 1.162e-12■□□□□ 10.3
LSM11P83369 EXOC3L4-206ENST00000560304 657 ntTSL 319.03■□□□□ 0.642e-12■□□□□ 10.3
LSM11P83369 EXOC3L4-204ENST00000559693 813 ntTSL 315.77■□□□□ 0.122e-12■□□□□ 10.3
LSM11P83369 CHKB-CPT1B-201ENST00000452668 546 ntTSL 410.43□□□□□ -0.746e-7■□□□□ 10.3
LSM11P83369 PCYT2-211ENST00000572924 732 ntTSL 213.71□□□□□ -0.212e-8■□□□□ 10.3
LSM11P83369 QTRT1-211ENST00000592376 500 ntTSL 39.59□□□□□ -0.871e-9■□□□□ 10.3
LSM11P83369 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.145e-8■□□□□ 10.3
LSM11P83369 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.025e-8■□□□□ 10.3
LSM11P83369 TMEM259-210ENST00000592618 1877 ntTSL 522.77■■□□□ 1.244e-13■□□□□ 10.2
LSM11P83369 TMEM259-208ENST00000592052 1637 nt22.13■■□□□ 1.134e-13■□□□□ 10.2
LSM11P83369 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.934e-13■□□□□ 10.2
LSM11P83369 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.84e-13■□□□□ 10.2
LSM11P83369 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.42■□□□□ 0.544e-13■□□□□ 10.2
LSM11P83369 TMEM259-205ENST00000586704 2538 ntTSL 516.93■□□□□ 0.34e-13■□□□□ 10.2
LSM11P83369 TMEM259-211ENST00000593068 1965 ntTSL 516.6■□□□□ 0.254e-13■□□□□ 10.2
LSM11P83369 TTLL3-201ENST00000310252 1561 ntAPPRIS ALT2 TSL 1 (best)10.37□□□□□ -0.753e-7■□□□□ 10.2
LSM11P83369 HNRNPH1-210ENST00000504549 980 ntTSL 515.03■□□□□ -06e-8■□□□□ 10.2
LSM11P83369 HNRNPH1-224ENST00000514731 1371 ntTSL 212.63□□□□□ -0.396e-8■□□□□ 10.2
LSM11P83369 HNRNPH1-239ENST00000521173 831 ntTSL 511.87□□□□□ -0.516e-8■□□□□ 10.2
LSM11P83369 HNRNPH1-247ENST00000523921 584 ntTSL 210.45□□□□□ -0.746e-8■□□□□ 10.2
LSM11P83369 SCFD1-209ENST00000553280 574 ntTSL 210.67□□□□□ -0.75e-6■□□□□ 10.2
LSM11P83369 PABPC1L-210ENST00000474208 308 ntTSL 510.52□□□□□ -0.731e-7■□□□□ 10.2
LSM11P83369 HMGN2-206ENST00000467700 932 ntTSL 215.53■□□□□ 0.084e-7■□□□□ 10.2
LSM11P83369 HMGN2-202ENST00000460563 1045 ntTSL 514.67□□□□□ -0.064e-7■□□□□ 10.2
LSM11P83369 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.424e-7■□□□□ 10.2
LSM11P83369 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.484e-7■□□□□ 10.2
LSM11P83369 HMGN2-203ENST00000463817 853 ntTSL 210.76□□□□□ -0.694e-7■□□□□ 10.2
LSM11P83369 HMGN2-208ENST00000479815 1030 ntTSL 510.22□□□□□ -0.774e-7■□□□□ 10.2
LSM11P83369 HMGN2-204ENST00000464888 565 ntTSL 29.23□□□□□ -0.934e-7■□□□□ 10.2
LSM11P83369 HMGN2-207ENST00000468388 320 ntTSL 37.4□□□□□ -1.224e-7■□□□□ 10.2
LSM11P83369 TMC6-213ENST00000589933 580 ntTSL 318.4■□□□□ 0.549e-7■□□□□ 10.2
LSM11P83369 NPEPL1-202ENST00000525068 768 ntTSL 213.3□□□□□ -0.282e-8■□□□□ 10.2
LSM11P83369 GGA1-217ENST00000463672 367 ntTSL 312.35□□□□□ -0.432e-7■□□□□ 10.2
LSM11P83369 ACSS2-223ENST00000494727 1030 ntTSL 212.22□□□□□ -0.451e-11■□□□□ 10.2
LSM11P83369 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.53e-6■□□□□ 10.2
LSM11P83369 DQX1-201ENST00000393951 2540 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.573e-6■□□□□ 10.2
Retrieved 100 of 11,495 protein–RNA pairs in 58.8 ms