RNA–Protein interactions for RNA: ENST00000463672.1

GGA1-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 3

Gene GGA1, Length 367 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-217ENST00000463672 NISCHQ9Y2I1 1504 aa35.47■■■■□ 3.27
GGA1-217ENST00000463672 CCDC180Q9P1Z9 1646 aa31.87■■■□□ 2.69
GGA1-217ENST00000463672 ABCC9O60706 1549 aa31.55■■■□□ 2.64
GGA1-217ENST00000463672 RB1CC1Q8TDY2 1594 aa30.22■■■□□ 2.43
GGA1-217ENST00000463672 NACADO15069 1562 aa30.04■■■□□ 2.4
GGA1-217ENST00000463672 MYO15BQ96JP2 1530 aa29.72■■■□□ 2.35
GGA1-217ENST00000463672 DCAF8L2P0C7V8 631 aa29.71■■■□□ 2.35
GGA1-217ENST00000463672 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.31
GGA1-217ENST00000463672 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
GGA1-217ENST00000463672 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
GGA1-217ENST00000463672 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
GGA1-217ENST00000463672 PABPN1Q86U42 306 aaKnown RBP eCLIP29.31■■■□□ 2.283e-9■□□□□ 10.6
GGA1-217ENST00000463672 BICRAQ9NZM4 1560 aa29.26■■■□□ 2.27
GGA1-217ENST00000463672 SHROOM4Q9ULL8 1493 aa29.04■■■□□ 2.24
GGA1-217ENST00000463672 SCRIBQ14160 1630 aa28.94■■■□□ 2.22
GGA1-217ENST00000463672 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
GGA1-217ENST00000463672 EIF4G1Q04637 1599 aaKnown RBP28.56■■■□□ 2.16
GGA1-217ENST00000463672 CECR2Q9BXF3 1484 aa28.44■■■□□ 2.14
GGA1-217ENST00000463672 NCAPD3P42695 1498 aa27.69■■■□□ 2.02
GGA1-217ENST00000463672 SMARCA4P51532 1647 aa27.66■■■□□ 2.02
GGA1-217ENST00000463672 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
GGA1-217ENST00000463672 ATAD2BQ9ULI0 1458 aa27.6■■■□□ 2.01
GGA1-217ENST00000463672 BAZ1AQ9NRL2 1556 aaPredicted RBP27.57■■■□□ 2
GGA1-217ENST00000463672 HMGXB3Q12766 1538 aa27.57■■■□□ 2
GGA1-217ENST00000463672 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
GGA1-217ENST00000463672 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
GGA1-217ENST00000463672 ERCC6Q03468 1493 aa27.29■■□□□ 1.96
GGA1-217ENST00000463672 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
GGA1-217ENST00000463672 CUX2O14529 1486 aa27.24■■□□□ 1.95
GGA1-217ENST00000463672 NESP48681 1621 aa27.12■■□□□ 1.93
GGA1-217ENST00000463672 LAMC3Q9Y6N6 1575 aa27.1■■□□□ 1.93
GGA1-217ENST00000463672 WIZO95785 1651 aa26.98■■□□□ 1.91
GGA1-217ENST00000463672 THOC2Q8NI27 1593 aaKnown RBP26.93■■□□□ 1.9
GGA1-217ENST00000463672 DNAJC5Q9H3Z4 198 aa26.92■■□□□ 1.9
GGA1-217ENST00000463672 PDS5BQ9NTI5 1447 aa26.9■■□□□ 1.9
GGA1-217ENST00000463672 KIF21AQ7Z4S6 1674 aa26.88■■□□□ 1.89
GGA1-217ENST00000463672 CADPSQ9ULU8 1353 aa26.83■■□□□ 1.88
GGA1-217ENST00000463672 RSF1Q96T23 1441 aaPredicted RBP26.77■■□□□ 1.88
GGA1-217ENST00000463672 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
GGA1-217ENST00000463672 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
GGA1-217ENST00000463672 WDR62O43379 1518 aa26.6■■□□□ 1.85
GGA1-217ENST00000463672 CEP164Q9UPV0 1460 aa26.59■■□□□ 1.85
GGA1-217ENST00000463672 CFTRP13569 1480 aa26.58■■□□□ 1.85
GGA1-217ENST00000463672 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
GGA1-217ENST00000463672 PRDM2Q13029 1718 aa26.44■■□□□ 1.82
GGA1-217ENST00000463672 CCDC88BA6NC98 1476 aa26.33■■□□□ 1.81
GGA1-217ENST00000463672 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
GGA1-217ENST00000463672 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
GGA1-217ENST00000463672 TOPBP1Q92547 1522 aa26.05■■□□□ 1.76
GGA1-217ENST00000463672 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
GGA1-217ENST00000463672 DNMBPQ6XZF7 1577 aa26.02■■□□□ 1.76
GGA1-217ENST00000463672 OSCARQ8IYS5 282 aa25.92■■□□□ 1.74
GGA1-217ENST00000463672 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
GGA1-217ENST00000463672 EIF4G3O43432 1585 aaKnown RBP25.87■■□□□ 1.73
GGA1-217ENST00000463672 TARBP1Q13395 1621 aaKnown RBP25.84■■□□□ 1.73
GGA1-217ENST00000463672 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
GGA1-217ENST00000463672 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
GGA1-217ENST00000463672 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
GGA1-217ENST00000463672 AQRO60306 1485 aaKnown RBP eCLIP25.68■■□□□ 1.72e-8■■■□□ 19.1
GGA1-217ENST00000463672 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
GGA1-217ENST00000463672 SOGA1O94964 1423 aa25.65■■□□□ 1.7
GGA1-217ENST00000463672 CUX1P39880 1505 aa25.64■■□□□ 1.7
GGA1-217ENST00000463672 RAD54L2Q9Y4B4 1467 aa25.64■■□□□ 1.69
GGA1-217ENST00000463672 CHD1O14646 1710 aa25.63■■□□□ 1.69
GGA1-217ENST00000463672 RIMBP3CA6NJZ7 1639 aa25.62■■□□□ 1.69
GGA1-217ENST00000463672 RIMBP3BA6NNM3 1639 aa25.62■■□□□ 1.69
GGA1-217ENST00000463672 RIMBP3Q9UFD9 1639 aa25.62■■□□□ 1.69
GGA1-217ENST00000463672 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
GGA1-217ENST00000463672 ARHGEF11O15085 1522 aa25.55■■□□□ 1.68
GGA1-217ENST00000463672 TDRD9Q8NDG6 1382 aaKnown RBP25.54■■□□□ 1.68
GGA1-217ENST00000463672 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
GGA1-217ENST00000463672 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
GGA1-217ENST00000463672 FBLN2P98095 1184 aa25.46■■□□□ 1.67
GGA1-217ENST00000463672 GRIN2BQ13224 1484 aa25.46■■□□□ 1.67
GGA1-217ENST00000463672 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
GGA1-217ENST00000463672 ABCA10Q8WWZ4 1543 aa25.4■■□□□ 1.66
GGA1-217ENST00000463672 SYNJ1O43426 1573 aa25.38■■□□□ 1.65
GGA1-217ENST00000463672 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
GGA1-217ENST00000463672 SYNJ2O15056 1496 aa25.37■■□□□ 1.65
GGA1-217ENST00000463672 GAPVD1Q14C86 1478 aa25.37■■□□□ 1.65
GGA1-217ENST00000463672 BIVM-ERCC5R4GMW8 1640 aa25.35■■□□□ 1.65
GGA1-217ENST00000463672 CLASP1Q7Z460 1538 aa25.35■■□□□ 1.65
GGA1-217ENST00000463672 CHMP7Q8WUX9 453 aaPredicted RBP25.34■■□□□ 1.65
GGA1-217ENST00000463672 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
GGA1-217ENST00000463672 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
GGA1-217ENST00000463672 ARAP1Q96P48 1450 aa25.28■■□□□ 1.64
GGA1-217ENST00000463672 CYB5RLQ6IPT4 315 aa25.25■■□□□ 1.63
GGA1-217ENST00000463672 ADAMTS12P58397 1594 aa25.17■■□□□ 1.62
GGA1-217ENST00000463672 GRIN2AQ12879 1464 aa25.13■■□□□ 1.61
GGA1-217ENST00000463672 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
GGA1-217ENST00000463672 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
GGA1-217ENST00000463672 NUP160Q12769 1436 aa25.03■■□□□ 1.6
GGA1-217ENST00000463672 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
GGA1-217ENST00000463672 SHROOM2Q13796 1616 aa24.95■■□□□ 1.58
GGA1-217ENST00000463672 TRHP20396 242 aaPredicted RBP24.94■■□□□ 1.58
GGA1-217ENST00000463672 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
GGA1-217ENST00000463672 RUSC2Q8N2Y8 1516 aa24.82■■□□□ 1.56
GGA1-217ENST00000463672 CUL7Q14999 1698 aa24.81■■□□□ 1.56
GGA1-217ENST00000463672 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
GGA1-217ENST00000463672 PRG4Q92954 1404 aaPredicted RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms