RNA–Protein interactions for RNA: ENST00000565891.1

SPG7-212, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-212ENST00000565891 NISCHQ9Y2I1 1504 aa36.98■■■■□ 3.51
SPG7-212ENST00000565891 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
SPG7-212ENST00000565891 ABCC9O60706 1549 aa33.05■■■□□ 2.88
SPG7-212ENST00000565891 RB1CC1Q8TDY2 1594 aa31.48■■■□□ 2.63
SPG7-212ENST00000565891 DCAF8L2P0C7V8 631 aa31.32■■■□□ 2.6
SPG7-212ENST00000565891 NACADO15069 1562 aa31.31■■■□□ 2.6
SPG7-212ENST00000565891 DNAJC5BQ9UF47 199 aa30.96■■■□□ 2.55
SPG7-212ENST00000565891 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
SPG7-212ENST00000565891 PABPN1Q86U42 306 aaKnown RBP eCLIP30.86■■■□□ 2.532e-8■■■□□ 18.5
SPG7-212ENST00000565891 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
SPG7-212ENST00000565891 ZCCHC6Q5VYS8 1495 aaKnown RBP30.64■■■□□ 2.5
SPG7-212ENST00000565891 DCAF1Q9Y4B6 1507 aa30.55■■■□□ 2.48
SPG7-212ENST00000565891 BICRAQ9NZM4 1560 aa30.52■■■□□ 2.48
SPG7-212ENST00000565891 SHROOM4Q9ULL8 1493 aa30.17■■■□□ 2.42
SPG7-212ENST00000565891 SCRIBQ14160 1630 aa30.15■■■□□ 2.42
SPG7-212ENST00000565891 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
SPG7-212ENST00000565891 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
SPG7-212ENST00000565891 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
SPG7-212ENST00000565891 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
SPG7-212ENST00000565891 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
SPG7-212ENST00000565891 SMARCA4P51532 1647 aa28.78■■■□□ 2.2
SPG7-212ENST00000565891 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
SPG7-212ENST00000565891 BAZ1AQ9NRL2 1556 aaPredicted RBP28.7■■■□□ 2.18
SPG7-212ENST00000565891 HMGXB3Q12766 1538 aa28.66■■■□□ 2.18
SPG7-212ENST00000565891 BAZ1BQ9UIG0 1483 aaKnown RBP28.57■■■□□ 2.16
SPG7-212ENST00000565891 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
SPG7-212ENST00000565891 PEG3Q9GZU2 1588 aa28.51■■■□□ 2.15
SPG7-212ENST00000565891 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
SPG7-212ENST00000565891 CUX2O14529 1486 aa28.44■■■□□ 2.14
SPG7-212ENST00000565891 NESP48681 1621 aa28.4■■■□□ 2.14
SPG7-212ENST00000565891 DNAJC5Q9H3Z4 198 aa28.39■■■□□ 2.14
SPG7-212ENST00000565891 LAMC3Q9Y6N6 1575 aa28.21■■■□□ 2.11
SPG7-212ENST00000565891 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
SPG7-212ENST00000565891 WIZO95785 1651 aa28.11■■■□□ 2.09
SPG7-212ENST00000565891 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
SPG7-212ENST00000565891 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
SPG7-212ENST00000565891 RSF1Q96T23 1441 aaPredicted RBP27.98■■■□□ 2.07
SPG7-212ENST00000565891 KIF21AQ7Z4S6 1674 aa27.96■■■□□ 2.07
SPG7-212ENST00000565891 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.04
SPG7-212ENST00000565891 TOP2AP11388 1531 aaKnown RBP27.79■■■□□ 2.04
SPG7-212ENST00000565891 CFTRP13569 1480 aa27.76■■■□□ 2.03
SPG7-212ENST00000565891 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
SPG7-212ENST00000565891 FANCD2Q9BXW9 1451 aa27.73■■■□□ 2.03
SPG7-212ENST00000565891 WDR62O43379 1518 aa27.72■■■□□ 2.03
SPG7-212ENST00000565891 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
SPG7-212ENST00000565891 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
SPG7-212ENST00000565891 PRDM2Q13029 1718 aa27.33■■□□□ 1.97
SPG7-212ENST00000565891 OSCARQ8IYS5 282 aa27.27■■□□□ 1.96
SPG7-212ENST00000565891 IFT140Q96RY7 1462 aa27.2■■□□□ 1.95
SPG7-212ENST00000565891 ABCC8Q09428 1581 aa27.2■■□□□ 1.94
SPG7-212ENST00000565891 TOPBP1Q92547 1522 aa27.2■■□□□ 1.94
SPG7-212ENST00000565891 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
SPG7-212ENST00000565891 ZNF608Q9ULD9 1512 aaPredicted RBP27.11■■□□□ 1.93
SPG7-212ENST00000565891 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
SPG7-212ENST00000565891 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.9
SPG7-212ENST00000565891 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
SPG7-212ENST00000565891 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
SPG7-212ENST00000565891 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
SPG7-212ENST00000565891 SUPT5HO00267 1087 aaKnown RBP26.9■■□□□ 1.9
SPG7-212ENST00000565891 SOGA1O94964 1423 aa26.87■■□□□ 1.89
SPG7-212ENST00000565891 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
SPG7-212ENST00000565891 FBLN2P98095 1184 aa26.8■■□□□ 1.88
SPG7-212ENST00000565891 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
SPG7-212ENST00000565891 FGD5Q6ZNL6 1462 aa26.78■■□□□ 1.88
SPG7-212ENST00000565891 CUX1P39880 1505 aa26.75■■□□□ 1.87
SPG7-212ENST00000565891 RIMBP3CA6NJZ7 1639 aa26.74■■□□□ 1.87
SPG7-212ENST00000565891 RIMBP3BA6NNM3 1639 aa26.74■■□□□ 1.87
SPG7-212ENST00000565891 RIMBP3Q9UFD9 1639 aa26.74■■□□□ 1.87
SPG7-212ENST00000565891 ARHGEF11O15085 1522 aa26.7■■□□□ 1.87
SPG7-212ENST00000565891 CHD1O14646 1710 aa26.67■■□□□ 1.86
SPG7-212ENST00000565891 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
SPG7-212ENST00000565891 CHMP7Q8WUX9 453 aaPredicted RBP26.63■■□□□ 1.85
SPG7-212ENST00000565891 SNAPC4Q5SXM2 1469 aa26.62■■□□□ 1.85
SPG7-212ENST00000565891 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
SPG7-212ENST00000565891 GRIN2BQ13224 1484 aa26.6■■□□□ 1.85
SPG7-212ENST00000565891 MAGI1Q96QZ7 1491 aaPredicted RBP26.56■■□□□ 1.84
SPG7-212ENST00000565891 GAPVD1Q14C86 1478 aa26.51■■□□□ 1.83
SPG7-212ENST00000565891 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
SPG7-212ENST00000565891 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
SPG7-212ENST00000565891 WRNQ14191 1432 aaPredicted RBP eCLIP26.45■■□□□ 1.82
SPG7-212ENST00000565891 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
SPG7-212ENST00000565891 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
SPG7-212ENST00000565891 CLASP1Q7Z460 1538 aa26.41■■□□□ 1.82
SPG7-212ENST00000565891 PBRM1Q86U86 1689 aa26.38■■□□□ 1.81
SPG7-212ENST00000565891 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
SPG7-212ENST00000565891 TOP2BQ02880 1626 aa26.34■■□□□ 1.81
SPG7-212ENST00000565891 BIVM-ERCC5R4GMW8 1640 aa26.31■■□□□ 1.8
SPG7-212ENST00000565891 TRHP20396 242 aaPredicted RBP26.3■■□□□ 1.8
SPG7-212ENST00000565891 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
SPG7-212ENST00000565891 FHAD1B1AJZ9 1412 aa26.2■■□□□ 1.78
SPG7-212ENST00000565891 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
SPG7-212ENST00000565891 ERICH3Q5RHP9 1530 aa26.15■■□□□ 1.78
SPG7-212ENST00000565891 NUP160Q12769 1436 aa26.14■■□□□ 1.78
SPG7-212ENST00000565891 CEP170Q5SW79 1584 aa26.08■■□□□ 1.77
SPG7-212ENST00000565891 ERCC6L2Q5T890 1561 aa26■■□□□ 1.75
SPG7-212ENST00000565891 JPH4Q96JJ6 628 aa25.97■■□□□ 1.75
SPG7-212ENST00000565891 SHROOM2Q13796 1616 aa25.95■■□□□ 1.74
SPG7-212ENST00000565891 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
SPG7-212ENST00000565891 PRG4Q92954 1404 aaPredicted RBP25.92■■□□□ 1.74
SPG7-212ENST00000565891 IGF1RP08069 1367 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms