RNA–Protein interactions for RNA: ENST00000598166.2

LTBP4-220, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-220ENST00000598166 NISCHQ9Y2I1 1504 aa37.05■■■■□ 3.52
LTBP4-220ENST00000598166 ABCC9O60706 1549 aa33.94■■■■□ 3.02
LTBP4-220ENST00000598166 CCDC180Q9P1Z9 1646 aa33.34■■■□□ 2.93
LTBP4-220ENST00000598166 DNAJC5BQ9UF47 199 aa32.42■■■□□ 2.78
LTBP4-220ENST00000598166 RB1CC1Q8TDY2 1594 aa32.01■■■□□ 2.71
LTBP4-220ENST00000598166 NACADO15069 1562 aa31.69■■■□□ 2.66
LTBP4-220ENST00000598166 PABPN1Q86U42 306 aaKnown RBP eCLIP31.6■■■□□ 2.65
LTBP4-220ENST00000598166 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
LTBP4-220ENST00000598166 UNC13AQ9UPW8 1703 aa31.24■■■□□ 2.59
LTBP4-220ENST00000598166 BICRAQ9NZM4 1560 aa31.17■■■□□ 2.58
LTBP4-220ENST00000598166 MYO15BQ96JP2 1530 aa31.12■■■□□ 2.57
LTBP4-220ENST00000598166 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.52
LTBP4-220ENST00000598166 CECR2Q9BXF3 1484 aa30.61■■■□□ 2.49
LTBP4-220ENST00000598166 SHROOM4Q9ULL8 1493 aa30.61■■■□□ 2.49
LTBP4-220ENST00000598166 CC2D2AQ9P2K1 1620 aa30.59■■■□□ 2.49
LTBP4-220ENST00000598166 DCAF1Q9Y4B6 1507 aa30.55■■■□□ 2.48
LTBP4-220ENST00000598166 EIF4G1Q04637 1599 aaKnown RBP30.41■■■□□ 2.46
LTBP4-220ENST00000598166 SCRIBQ14160 1630 aa30.4■■■□□ 2.46
LTBP4-220ENST00000598166 DNAJC5Q9H3Z4 198 aa30.05■■■□□ 2.4
LTBP4-220ENST00000598166 CUX2O14529 1486 aa29.39■■■□□ 2.3
LTBP4-220ENST00000598166 NCAPD3P42695 1498 aa29.35■■■□□ 2.29
LTBP4-220ENST00000598166 ERCC6Q03468 1493 aa29.27■■■□□ 2.28
LTBP4-220ENST00000598166 ATAD2BQ9ULI0 1458 aa29.17■■■□□ 2.26
LTBP4-220ENST00000598166 NESP48681 1621 aa29.04■■■□□ 2.24
LTBP4-220ENST00000598166 HMGXB3Q12766 1538 aa28.99■■■□□ 2.23
LTBP4-220ENST00000598166 SMARCA2P51531 1590 aa28.99■■■□□ 2.23
LTBP4-220ENST00000598166 SMARCA4P51532 1647 aa28.96■■■□□ 2.23
LTBP4-220ENST00000598166 BAZ1BQ9UIG0 1483 aaKnown RBP28.82■■■□□ 2.2
LTBP4-220ENST00000598166 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
LTBP4-220ENST00000598166 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
LTBP4-220ENST00000598166 PEG3Q9GZU2 1588 aa28.7■■■□□ 2.18
LTBP4-220ENST00000598166 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
LTBP4-220ENST00000598166 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
LTBP4-220ENST00000598166 PDS5BQ9NTI5 1447 aa28.56■■■□□ 2.16
LTBP4-220ENST00000598166 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
LTBP4-220ENST00000598166 TRIM41Q8WV44 630 aa28.49■■■□□ 2.15
LTBP4-220ENST00000598166 CADPSQ9ULU8 1353 aa28.43■■■□□ 2.14
LTBP4-220ENST00000598166 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
LTBP4-220ENST00000598166 WDR62O43379 1518 aa28.28■■■□□ 2.12
LTBP4-220ENST00000598166 RSF1Q96T23 1441 aaPredicted RBP28.22■■■□□ 2.11
LTBP4-220ENST00000598166 WIZO95785 1651 aa28.19■■■□□ 2.1
LTBP4-220ENST00000598166 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
LTBP4-220ENST00000598166 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
LTBP4-220ENST00000598166 OSCARQ8IYS5 282 aa28.06■■■□□ 2.08
LTBP4-220ENST00000598166 CFTRP13569 1480 aa28■■■□□ 2.07
LTBP4-220ENST00000598166 TOP2AP11388 1531 aaKnown RBP27.9■■■□□ 2.06
LTBP4-220ENST00000598166 URB2Q14146 1524 aaKnown RBP27.89■■■□□ 2.06
LTBP4-220ENST00000598166 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
LTBP4-220ENST00000598166 RIMBP3CA6NJZ7 1639 aa27.66■■■□□ 2.02
LTBP4-220ENST00000598166 RIMBP3BA6NNM3 1639 aa27.66■■■□□ 2.02
LTBP4-220ENST00000598166 RIMBP3Q9UFD9 1639 aa27.66■■■□□ 2.02
LTBP4-220ENST00000598166 ZNF608Q9ULD9 1512 aaPredicted RBP27.65■■■□□ 2.02
LTBP4-220ENST00000598166 IFT140Q96RY7 1462 aa27.58■■■□□ 2.01
LTBP4-220ENST00000598166 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
LTBP4-220ENST00000598166 ARHGEF11O15085 1522 aa27.55■■■□□ 2
LTBP4-220ENST00000598166 TOPBP1Q92547 1522 aa27.49■■□□□ 1.99
LTBP4-220ENST00000598166 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
LTBP4-220ENST00000598166 CYB5RLQ6IPT4 315 aa27.45■■□□□ 1.98
LTBP4-220ENST00000598166 EIF4G3O43432 1585 aaKnown RBP27.37■■□□□ 1.97
LTBP4-220ENST00000598166 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
LTBP4-220ENST00000598166 AQRO60306 1485 aaKnown RBP eCLIP27.35■■□□□ 1.97
LTBP4-220ENST00000598166 DNMBPQ6XZF7 1577 aa27.3■■□□□ 1.96
LTBP4-220ENST00000598166 TARBP1Q13395 1621 aaKnown RBP27.27■■□□□ 1.96
LTBP4-220ENST00000598166 ARAP1Q96P48 1450 aa27.26■■□□□ 1.95
LTBP4-220ENST00000598166 TRHP20396 242 aaPredicted RBP27.26■■□□□ 1.95
LTBP4-220ENST00000598166 FBLN2P98095 1184 aa27.25■■□□□ 1.95
LTBP4-220ENST00000598166 CHD1O14646 1710 aa27.23■■□□□ 1.95
LTBP4-220ENST00000598166 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
LTBP4-220ENST00000598166 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
LTBP4-220ENST00000598166 TDRD9Q8NDG6 1382 aaKnown RBP27.12■■□□□ 1.93
LTBP4-220ENST00000598166 SOGA1O94964 1423 aa27.07■■□□□ 1.92
LTBP4-220ENST00000598166 SNAPC4Q5SXM2 1469 aa26.99■■□□□ 1.91
LTBP4-220ENST00000598166 CLASP1Q7Z460 1538 aa26.98■■□□□ 1.91
LTBP4-220ENST00000598166 CHMP7Q8WUX9 453 aaPredicted RBP26.97■■□□□ 1.91
LTBP4-220ENST00000598166 FGD5Q6ZNL6 1462 aa26.93■■□□□ 1.9
LTBP4-220ENST00000598166 MAGI1Q96QZ7 1491 aaPredicted RBP26.88■■□□□ 1.89
LTBP4-220ENST00000598166 WDR97A6NE52 1622 aa26.87■■□□□ 1.89
LTBP4-220ENST00000598166 SYNJ1O43426 1573 aa26.86■■□□□ 1.89
LTBP4-220ENST00000598166 GRIN2BQ13224 1484 aa26.86■■□□□ 1.89
LTBP4-220ENST00000598166 CUX1P39880 1505 aa26.85■■□□□ 1.89
LTBP4-220ENST00000598166 SYNJ2O15056 1496 aa26.82■■□□□ 1.88
LTBP4-220ENST00000598166 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
LTBP4-220ENST00000598166 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
LTBP4-220ENST00000598166 PBRM1Q86U86 1689 aa26.61■■□□□ 1.85
LTBP4-220ENST00000598166 ABCA10Q8WWZ4 1543 aa26.6■■□□□ 1.85
LTBP4-220ENST00000598166 WRNQ14191 1432 aaPredicted RBP eCLIP26.59■■□□□ 1.85
LTBP4-220ENST00000598166 ERCC6L2Q5T890 1561 aa26.57■■□□□ 1.84
LTBP4-220ENST00000598166 ABCA5Q8WWZ7 1642 aa26.56■■□□□ 1.84
LTBP4-220ENST00000598166 GRIN2AQ12879 1464 aa26.51■■□□□ 1.83
LTBP4-220ENST00000598166 TOP2BQ02880 1626 aa26.5■■□□□ 1.83
LTBP4-220ENST00000598166 BIVM-ERCC5R4GMW8 1640 aa26.49■■□□□ 1.83
LTBP4-220ENST00000598166 NUP160Q12769 1436 aa26.47■■□□□ 1.83
LTBP4-220ENST00000598166 CEP170Q5SW79 1584 aa26.45■■□□□ 1.82
LTBP4-220ENST00000598166 ADAMTS12P58397 1594 aa26.39■■□□□ 1.82
LTBP4-220ENST00000598166 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
LTBP4-220ENST00000598166 SHROOM2Q13796 1616 aa26.35■■□□□ 1.81
LTBP4-220ENST00000598166 PRG4Q92954 1404 aaPredicted RBP26.26■■□□□ 1.79
LTBP4-220ENST00000598166 JPH4Q96JJ6 628 aa26.25■■□□□ 1.79
LTBP4-220ENST00000598166 ERICH3Q5RHP9 1530 aa26.23■■□□□ 1.79
LTBP4-220ENST00000598166 KIF13AQ9H1H9 1805 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms