RNA–Protein interactions for RNA: ENST00000592876.1

CLASRP-216, Transcript of CLK4 associating serine/arginine rich protein, humanhuman

TSL 3

Gene CLASRP, Length 751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASRP-216ENST00000592876 NISCHQ9Y2I1 1504 aa29.61■■■□□ 2.33
CLASRP-216ENST00000592876 ABCC9O60706 1549 aa27.1■■□□□ 1.93
CLASRP-216ENST00000592876 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
CLASRP-216ENST00000592876 DNAJC5BQ9UF47 199 aa25.74■■□□□ 1.71
CLASRP-216ENST00000592876 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
CLASRP-216ENST00000592876 NACADO15069 1562 aa25.35■■□□□ 1.65
CLASRP-216ENST00000592876 DCAF8L2P0C7V8 631 aa25.3■■□□□ 1.64
CLASRP-216ENST00000592876 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.631e-6■■□□□ 12
CLASRP-216ENST00000592876 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
CLASRP-216ENST00000592876 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
CLASRP-216ENST00000592876 BICRAQ9NZM4 1560 aa24.82■■□□□ 1.56
CLASRP-216ENST00000592876 SHROOM4Q9ULL8 1493 aa24.49■■□□□ 1.51
CLASRP-216ENST00000592876 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.51
CLASRP-216ENST00000592876 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.5
CLASRP-216ENST00000592876 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
CLASRP-216ENST00000592876 CC2D2AQ9P2K1 1620 aa24.41■■□□□ 1.5
CLASRP-216ENST00000592876 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
CLASRP-216ENST00000592876 EIF4G1Q04637 1599 aaKnown RBP24.28■■□□□ 1.48
CLASRP-216ENST00000592876 DNAJC5Q9H3Z4 198 aa23.93■■□□□ 1.42
CLASRP-216ENST00000592876 CUX2O14529 1486 aa23.49■■□□□ 1.35
CLASRP-216ENST00000592876 ERCC6Q03468 1493 aa23.45■■□□□ 1.34
CLASRP-216ENST00000592876 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
CLASRP-216ENST00000592876 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
CLASRP-216ENST00000592876 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
CLASRP-216ENST00000592876 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
CLASRP-216ENST00000592876 NESP48681 1621 aa23.15■■□□□ 1.3
CLASRP-216ENST00000592876 SMARCA4P51532 1647 aa23.14■■□□□ 1.29
CLASRP-216ENST00000592876 BAZ1BQ9UIG0 1483 aaKnown RBP23.07■■□□□ 1.28
CLASRP-216ENST00000592876 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
CLASRP-216ENST00000592876 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
CLASRP-216ENST00000592876 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
CLASRP-216ENST00000592876 PEG3Q9GZU2 1588 aa22.9■■□□□ 1.26
CLASRP-216ENST00000592876 PDS5BQ9NTI5 1447 aa22.87■■□□□ 1.25
CLASRP-216ENST00000592876 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
CLASRP-216ENST00000592876 TRIM41Q8WV44 630 aa22.78■■□□□ 1.24
CLASRP-216ENST00000592876 KIF21AQ7Z4S6 1674 aa22.77■■□□□ 1.24
CLASRP-216ENST00000592876 CADPSQ9ULU8 1353 aa22.73■■□□□ 1.23
CLASRP-216ENST00000592876 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
CLASRP-216ENST00000592876 WDR62O43379 1518 aa22.57■■□□□ 1.2
CLASRP-216ENST00000592876 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
CLASRP-216ENST00000592876 WIZO95785 1651 aa22.49■■□□□ 1.19
CLASRP-216ENST00000592876 FANCD2Q9BXW9 1451 aa22.45■■□□□ 1.18
CLASRP-216ENST00000592876 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
CLASRP-216ENST00000592876 CFTRP13569 1480 aa22.35■■□□□ 1.17
CLASRP-216ENST00000592876 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
CLASRP-216ENST00000592876 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
CLASRP-216ENST00000592876 TOP2AP11388 1531 aaKnown RBP22.2■■□□□ 1.14
CLASRP-216ENST00000592876 IFT140Q96RY7 1462 aa22.08■■□□□ 1.12
CLASRP-216ENST00000592876 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
CLASRP-216ENST00000592876 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
CLASRP-216ENST00000592876 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
CLASRP-216ENST00000592876 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
CLASRP-216ENST00000592876 PRDM2Q13029 1718 aa21.99■■□□□ 1.11
CLASRP-216ENST00000592876 ARHGEF11O15085 1522 aa21.99■■□□□ 1.11
CLASRP-216ENST00000592876 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
CLASRP-216ENST00000592876 TOPBP1Q92547 1522 aa21.97■■□□□ 1.11
CLASRP-216ENST00000592876 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
CLASRP-216ENST00000592876 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
CLASRP-216ENST00000592876 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
CLASRP-216ENST00000592876 TRHP20396 242 aaPredicted RBP21.84■■□□□ 1.09
CLASRP-216ENST00000592876 FBLN2P98095 1184 aa21.84■■□□□ 1.09
CLASRP-216ENST00000592876 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.094e-8■■■□□ 15.8
CLASRP-216ENST00000592876 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
CLASRP-216ENST00000592876 CHD1O14646 1710 aa21.75■■□□□ 1.07
CLASRP-216ENST00000592876 ARAP1Q96P48 1450 aa21.75■■□□□ 1.07
CLASRP-216ENST00000592876 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
CLASRP-216ENST00000592876 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
CLASRP-216ENST00000592876 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
CLASRP-216ENST00000592876 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
CLASRP-216ENST00000592876 SOGA1O94964 1423 aa21.66■■□□□ 1.06
CLASRP-216ENST00000592876 CHMP7Q8WUX9 453 aaPredicted RBP21.62■■□□□ 1.05
CLASRP-216ENST00000592876 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
CLASRP-216ENST00000592876 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
CLASRP-216ENST00000592876 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
CLASRP-216ENST00000592876 SYNJ1O43426 1573 aa21.52■■□□□ 1.04
CLASRP-216ENST00000592876 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.03
CLASRP-216ENST00000592876 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
CLASRP-216ENST00000592876 GRIN2BQ13224 1484 aa21.49■■□□□ 1.03
CLASRP-216ENST00000592876 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
CLASRP-216ENST00000592876 SYNJ2O15056 1496 aa21.45■■□□□ 1.03
CLASRP-216ENST00000592876 CUX1P39880 1505 aa21.45■■□□□ 1.02
CLASRP-216ENST00000592876 GAPVD1Q14C86 1478 aa21.37■■□□□ 1.01
CLASRP-216ENST00000592876 PBRM1Q86U86 1689 aa21.29■■□□□ 1
CLASRP-216ENST00000592876 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
CLASRP-216ENST00000592876 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
CLASRP-216ENST00000592876 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
CLASRP-216ENST00000592876 ERCC6L2Q5T890 1561 aa21.16■□□□□ 0.98
CLASRP-216ENST00000592876 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.98
CLASRP-216ENST00000592876 NUP160Q12769 1436 aa21.14■□□□□ 0.98
CLASRP-216ENST00000592876 CEP170Q5SW79 1584 aa21.12■□□□□ 0.97
CLASRP-216ENST00000592876 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
CLASRP-216ENST00000592876 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
CLASRP-216ENST00000592876 SUPT5HO00267 1087 aaKnown RBP21.08■□□□□ 0.97
CLASRP-216ENST00000592876 SHROOM2Q13796 1616 aa21.02■□□□□ 0.96
CLASRP-216ENST00000592876 JPH4Q96JJ6 628 aa21■□□□□ 0.95
CLASRP-216ENST00000592876 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
CLASRP-216ENST00000592876 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
CLASRP-216ENST00000592876 TOP2BQ02880 1626 aa20.99■□□□□ 0.95
CLASRP-216ENST00000592876 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
CLASRP-216ENST00000592876 NPM1P06748 294 aaKnown RBP eCLIP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms