Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
BBS4Q96RK4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
BBS4Q96RK4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.05■□□□□ 0.48
BBS4Q96RK4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
BBS4Q96RK4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.05■□□□□ 0.48
BBS4Q96RK4 IRX1P1-201ENST00000438849 1838 ntBASIC18.05■□□□□ 0.48
BBS4Q96RK4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BBS4Q96RK4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BBS4Q96RK4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.04■□□□□ 0.48
BBS4Q96RK4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.04■□□□□ 0.48
BBS4Q96RK4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 TSPY21P-201ENST00000433481 731 ntBASIC18.04■□□□□ 0.48
BBS4Q96RK4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BBS4Q96RK4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.04■□□□□ 0.48
BBS4Q96RK4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.04■□□□□ 0.48
BBS4Q96RK4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BBS4Q96RK4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
BBS4Q96RK4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BBS4Q96RK4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 AL445675.2-201ENST00000620291 557 ntBASIC18.03■□□□□ 0.48
BBS4Q96RK4 AC131212.4-201ENST00000623606 975 ntBASIC18.03■□□□□ 0.48
BBS4Q96RK4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BBS4Q96RK4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BBS4Q96RK4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.02■□□□□ 0.48
BBS4Q96RK4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BBS4Q96RK4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BBS4Q96RK4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BBS4Q96RK4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BBS4Q96RK4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 NIFKP9-201ENST00000419265 221 ntBASIC18.02■□□□□ 0.48
BBS4Q96RK4 AL353807.1-201ENST00000427475 662 ntBASIC18.02■□□□□ 0.48
BBS4Q96RK4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BBS4Q96RK4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BBS4Q96RK4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.02■□□□□ 0.48
BBS4Q96RK4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
BBS4Q96RK4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms