RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 NISCHQ9Y2I1 1504 aa48.33■■■■■ 5.33
FBXO28-202ENST00000424254 CCDC180Q9P1Z9 1646 aa42.98■■■■■ 4.47
FBXO28-202ENST00000424254 ABCC9O60706 1549 aa42.5■■■■■ 4.39
FBXO28-202ENST00000424254 RB1CC1Q8TDY2 1594 aa40.65■■■■■ 4.1
FBXO28-202ENST00000424254 DCAF8L2P0C7V8 631 aa40.55■■■■■ 4.08
FBXO28-202ENST00000424254 NACADO15069 1562 aa40.55■■■■■ 4.08
FBXO28-202ENST00000424254 MYO15BQ96JP2 1530 aa40.21■■■■■ 4.03
FBXO28-202ENST00000424254 ZCCHC6Q5VYS8 1495 aaKnown RBP40.2■■■■■ 4.03
FBXO28-202ENST00000424254 DCAF1Q9Y4B6 1507 aa39.94■■■■□ 3.98
FBXO28-202ENST00000424254 PABPN1Q86U42 306 aaKnown RBP eCLIP39.71■■■■□ 3.95
FBXO28-202ENST00000424254 UNC13AQ9UPW8 1703 aa39.64■■■■□ 3.94
FBXO28-202ENST00000424254 BICRAQ9NZM4 1560 aa39.49■■■■□ 3.91
FBXO28-202ENST00000424254 DNAJC5BQ9UF47 199 aa39.36■■■■□ 3.89
FBXO28-202ENST00000424254 SCRIBQ14160 1630 aa39.29■■■■□ 3.88
FBXO28-202ENST00000424254 SHROOM4Q9ULL8 1493 aa39■■■■□ 3.83
FBXO28-202ENST00000424254 EIF4G1Q04637 1599 aaKnown RBP38.47■■■■□ 3.75
FBXO28-202ENST00000424254 CC2D2AQ9P2K1 1620 aa38.37■■■■□ 3.73
FBXO28-202ENST00000424254 CECR2Q9BXF3 1484 aa38.21■■■■□ 3.71
FBXO28-202ENST00000424254 SMARCA4P51532 1647 aa37.52■■■■□ 3.6
FBXO28-202ENST00000424254 NCAPD3P42695 1498 aa37.47■■■■□ 3.59
FBXO28-202ENST00000424254 ATAD2BQ9ULI0 1458 aa37.46■■■■□ 3.59
FBXO28-202ENST00000424254 BAZ1AQ9NRL2 1556 aaPredicted RBP37.45■■■■□ 3.58
FBXO28-202ENST00000424254 SMARCA2P51531 1590 aa37.34■■■■□ 3.57
FBXO28-202ENST00000424254 MROH2BQ7Z745 1585 aa37.27■■■■□ 3.56
FBXO28-202ENST00000424254 HMGXB3Q12766 1538 aa37.22■■■■□ 3.55
FBXO28-202ENST00000424254 PEG3Q9GZU2 1588 aa37.16■■■■□ 3.54
FBXO28-202ENST00000424254 BAZ1BQ9UIG0 1483 aaKnown RBP37.11■■■■□ 3.53
FBXO28-202ENST00000424254 WIZO95785 1651 aa36.79■■■■□ 3.48
FBXO28-202ENST00000424254 RSF1Q96T23 1441 aaPredicted RBP36.75■■■■□ 3.47
FBXO28-202ENST00000424254 NESP48681 1621 aa36.7■■■■□ 3.47
FBXO28-202ENST00000424254 ERCC6Q03468 1493 aa36.62■■■■□ 3.45
FBXO28-202ENST00000424254 LAMC3Q9Y6N6 1575 aa36.46■■■■□ 3.43
FBXO28-202ENST00000424254 TOP2AP11388 1531 aaKnown RBP36.4■■■■□ 3.42
FBXO28-202ENST00000424254 CADPSQ9ULU8 1353 aa36.38■■■■□ 3.41
FBXO28-202ENST00000424254 CUX2O14529 1486 aa36.33■■■■□ 3.41
FBXO28-202ENST00000424254 PDS5BQ9NTI5 1447 aa36.28■■■■□ 3.4
FBXO28-202ENST00000424254 THOC2Q8NI27 1593 aaKnown RBP36.14■■■■□ 3.38
FBXO28-202ENST00000424254 KIF21AQ7Z4S6 1674 aa36.13■■■■□ 3.37
FBXO28-202ENST00000424254 CFTRP13569 1480 aa36.09■■■■□ 3.37
FBXO28-202ENST00000424254 CCDC88BA6NC98 1476 aa36.01■■■■□ 3.35
FBXO28-202ENST00000424254 FANCD2Q9BXW9 1451 aa35.95■■■■□ 3.35
FBXO28-202ENST00000424254 MRC2Q9UBG0 1479 aa35.94■■■■□ 3.34
FBXO28-202ENST00000424254 CEP164Q9UPV0 1460 aa35.92■■■■□ 3.34
FBXO28-202ENST00000424254 WDR62O43379 1518 aa35.82■■■■□ 3.32
FBXO28-202ENST00000424254 DNAJC5Q9H3Z4 198 aa35.63■■■■□ 3.29
FBXO28-202ENST00000424254 URB2Q14146 1524 aaKnown RBP35.62■■■■□ 3.29
FBXO28-202ENST00000424254 SUPT5HO00267 1087 aaKnown RBP35.59■■■■□ 3.29
FBXO28-202ENST00000424254 PRDM2Q13029 1718 aa35.58■■■■□ 3.29
FBXO28-202ENST00000424254 TOPBP1Q92547 1522 aa35.33■■■■□ 3.25
FBXO28-202ENST00000424254 ABCC8Q09428 1581 aa35.26■■■■□ 3.23
FBXO28-202ENST00000424254 DNMBPQ6XZF7 1577 aa35.23■■■■□ 3.23
FBXO28-202ENST00000424254 IFT140Q96RY7 1462 aa35.18■■■■□ 3.22
FBXO28-202ENST00000424254 ZNF608Q9ULD9 1512 aaPredicted RBP35.1■■■■□ 3.21
FBXO28-202ENST00000424254 POLA1P09884 1462 aaPredicted RBP35.03■■■■□ 3.2
FBXO28-202ENST00000424254 CUX1P39880 1505 aa34.96■■■■□ 3.19
FBXO28-202ENST00000424254 TARBP1Q13395 1621 aaKnown RBP34.94■■■■□ 3.18
FBXO28-202ENST00000424254 RAD54L2Q9Y4B4 1467 aa34.9■■■■□ 3.18
FBXO28-202ENST00000424254 FGD5Q6ZNL6 1462 aa34.89■■■■□ 3.18
FBXO28-202ENST00000424254 SOGA1O94964 1423 aa34.88■■■■□ 3.17
FBXO28-202ENST00000424254 EIF4G3O43432 1585 aaKnown RBP34.87■■■■□ 3.17
FBXO28-202ENST00000424254 AQRO60306 1485 aaKnown RBP eCLIP34.86■■■■□ 3.171e-6■□□□□ 8.5
FBXO28-202ENST00000424254 OSCARQ8IYS5 282 aa34.81■■■■□ 3.16
FBXO28-202ENST00000424254 TDRD9Q8NDG6 1382 aaKnown RBP34.75■■■■□ 3.15
FBXO28-202ENST00000424254 WRNQ14191 1432 aaPredicted RBP eCLIP34.64■■■■□ 3.14
FBXO28-202ENST00000424254 WDR97A6NE52 1622 aa34.59■■■■□ 3.13
FBXO28-202ENST00000424254 SYNJ1O43426 1573 aa34.55■■■■□ 3.12
FBXO28-202ENST00000424254 TOP2BQ02880 1626 aa34.53■■■■□ 3.12
FBXO28-202ENST00000424254 ABCA10Q8WWZ4 1543 aa34.53■■■■□ 3.12
FBXO28-202ENST00000424254 SNAPC4Q5SXM2 1469 aa34.51■■■■□ 3.12
FBXO28-202ENST00000424254 BIVM-ERCC5R4GMW8 1640 aa34.5■■■■□ 3.11
FBXO28-202ENST00000424254 FBLN2P98095 1184 aa34.5■■■■□ 3.11
FBXO28-202ENST00000424254 GRIN2BQ13224 1484 aa34.49■■■■□ 3.11
FBXO28-202ENST00000424254 GAPVD1Q14C86 1478 aa34.45■■■■□ 3.11
FBXO28-202ENST00000424254 CHD1O14646 1710 aa34.42■■■■□ 3.1
FBXO28-202ENST00000424254 MAGI1Q96QZ7 1491 aaPredicted RBP34.42■■■■□ 3.1
FBXO28-202ENST00000424254 ABCA5Q8WWZ7 1642 aa34.38■■■■□ 3.09
FBXO28-202ENST00000424254 TRIM41Q8WV44 630 aa34.34■■■■□ 3.09
FBXO28-202ENST00000424254 CHMP7Q8WUX9 453 aaPredicted RBP34.33■■■■□ 3.09
FBXO28-202ENST00000424254 SYNJ2O15056 1496 aa34.3■■■■□ 3.08
FBXO28-202ENST00000424254 PBRM1Q86U86 1689 aa34.29■■■■□ 3.08
FBXO28-202ENST00000424254 ARHGEF11O15085 1522 aa34.24■■■■□ 3.07
FBXO28-202ENST00000424254 RIMBP3CA6NJZ7 1639 aa34.23■■■■□ 3.07
FBXO28-202ENST00000424254 RIMBP3BA6NNM3 1639 aa34.23■■■■□ 3.07
FBXO28-202ENST00000424254 RIMBP3Q9UFD9 1639 aa34.23■■■■□ 3.07
FBXO28-202ENST00000424254 CLASP1Q7Z460 1538 aa34.14■■■■□ 3.06
FBXO28-202ENST00000424254 ADAMTS12P58397 1594 aa34.1■■■■□ 3.05
FBXO28-202ENST00000424254 ERICH3Q5RHP9 1530 aa34.08■■■■□ 3.05
FBXO28-202ENST00000424254 GRIN2AQ12879 1464 aa34.05■■■■□ 3.04
FBXO28-202ENST00000424254 FHAD1B1AJZ9 1412 aa34.05■■■■□ 3.04
FBXO28-202ENST00000424254 ARAP1Q96P48 1450 aa33.97■■■■□ 3.03
FBXO28-202ENST00000424254 CYB5RLQ6IPT4 315 aa33.97■■■■□ 3.03
FBXO28-202ENST00000424254 NUP160Q12769 1436 aa33.93■■■■□ 3.02
FBXO28-202ENST00000424254 KIF27Q86VH2 1401 aa33.91■■■■□ 3.02
FBXO28-202ENST00000424254 CEP170Q5SW79 1584 aa33.89■■■■□ 3.02
FBXO28-202ENST00000424254 IGF1RP08069 1367 aa33.86■■■■□ 3.01
FBXO28-202ENST00000424254 ERCC6L2Q5T890 1561 aa33.68■■■□□ 2.98
FBXO28-202ENST00000424254 CUL7Q14999 1698 aa33.66■■■□□ 2.98
FBXO28-202ENST00000424254 SHROOM2Q13796 1616 aa33.64■■■□□ 2.98
FBXO28-202ENST00000424254 CARMIL1Q5VZK9 1371 aa33.63■■■□□ 2.97
FBXO28-202ENST00000424254 RUSC2Q8N2Y8 1516 aa33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms