RNA–Protein interactions for RNA: ENST00000304076.6

VAV1-201, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene VAV1, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-201ENST00000304076 NISCHQ9Y2I1 1504 aa39.38■■■■□ 3.9
VAV1-201ENST00000304076 CCDC180Q9P1Z9 1646 aa34.21■■■■□ 3.07
VAV1-201ENST00000304076 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
VAV1-201ENST00000304076 SUPT5HO00267 1087 aaKnown RBP33.08■■■□□ 2.89
VAV1-201ENST00000304076 ZCCHC6Q5VYS8 1495 aaKnown RBP33.04■■■□□ 2.88
VAV1-201ENST00000304076 DCAF8L2P0C7V8 631 aa32.97■■■□□ 2.87
VAV1-201ENST00000304076 ABCC9O60706 1549 aa32.79■■■□□ 2.84
VAV1-201ENST00000304076 DCAF1Q9Y4B6 1507 aa32.38■■■□□ 2.77
VAV1-201ENST00000304076 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
VAV1-201ENST00000304076 MYO15BQ96JP2 1530 aa32.26■■■□□ 2.75
VAV1-201ENST00000304076 HRCP23327 699 aa32.04■■■□□ 2.72
VAV1-201ENST00000304076 NACADO15069 1562 aa31.94■■■□□ 2.7
VAV1-201ENST00000304076 PCGF6Q9BYE7 350 aa31.84■■■□□ 2.69
VAV1-201ENST00000304076 SCRIBQ14160 1630 aa31.74■■■□□ 2.67
VAV1-201ENST00000304076 RB1CC1Q8TDY2 1594 aa31.74■■■□□ 2.67
VAV1-201ENST00000304076 PPARGC1BQ86YN6 1023 aaKnown RBP31.48■■■□□ 2.63
VAV1-201ENST00000304076 LOC105371045A0A1W2PR82 267 aa31.47■■■□□ 2.63
VAV1-201ENST00000304076 UNC13AQ9UPW8 1703 aa31.17■■■□□ 2.58
VAV1-201ENST00000304076 PABPN1Q86U42 306 aaKnown RBP eCLIP31.02■■■□□ 2.56
VAV1-201ENST00000304076 TRIM26Q12899 539 aaPredicted RBP30.99■■■□□ 2.55
VAV1-201ENST00000304076 BICRAQ9NZM4 1560 aa30.85■■■□□ 2.53
VAV1-201ENST00000304076 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.52
VAV1-201ENST00000304076 RSF1Q96T23 1441 aaPredicted RBP30.74■■■□□ 2.51
VAV1-201ENST00000304076 TRIM41Q8WV44 630 aa30.68■■■□□ 2.5
VAV1-201ENST00000304076 FAM9AQ8IZU1 332 aaPredicted RBP30.6■■■□□ 2.49
VAV1-201ENST00000304076 MROH2BQ7Z745 1585 aa30.52■■■□□ 2.48
VAV1-201ENST00000304076 EHMT2Q96KQ7 1210 aa30.45■■■□□ 2.46
VAV1-201ENST00000304076 ZEB1P37275 1124 aaPredicted RBP30.42■■■□□ 2.46
VAV1-201ENST00000304076 BAZ1AQ9NRL2 1556 aaPredicted RBP30.38■■■□□ 2.45
VAV1-201ENST00000304076 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
VAV1-201ENST00000304076 WIZO95785 1651 aa30.28■■■□□ 2.44
VAV1-201ENST00000304076 EIF4G1Q04637 1599 aaKnown RBP29.94■■■□□ 2.38
VAV1-201ENST00000304076 SCAF1Q9H7N4 1312 aaKnown RBP29.88■■■□□ 2.37
VAV1-201ENST00000304076 ATAD2BQ9ULI0 1458 aa29.85■■■□□ 2.37
VAV1-201ENST00000304076 TOP2AP11388 1531 aaKnown RBP29.83■■■□□ 2.37
VAV1-201ENST00000304076 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
VAV1-201ENST00000304076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.8■■■□□ 2.36
VAV1-201ENST00000304076 SMARCA2P51531 1590 aa29.74■■■□□ 2.35
VAV1-201ENST00000304076 CCER1Q8TC90 406 aaPredicted RBP29.7■■■□□ 2.34
VAV1-201ENST00000304076 BAZ1BQ9UIG0 1483 aaKnown RBP29.69■■■□□ 2.34
VAV1-201ENST00000304076 CCDC88BA6NC98 1476 aa29.63■■■□□ 2.33
VAV1-201ENST00000304076 PELP1Q8IZL8 1130 aaKnown RBP29.59■■■□□ 2.33
VAV1-201ENST00000304076 TTBK1Q5TCY1 1321 aaPredicted RBP29.56■■■□□ 2.32
VAV1-201ENST00000304076 CC2D2AQ9P2K1 1620 aa29.55■■■□□ 2.32
VAV1-201ENST00000304076 NCAPD3P42695 1498 aa29.53■■■□□ 2.32
VAV1-201ENST00000304076 ABCC8Q09428 1581 aa29.46■■■□□ 2.31
VAV1-201ENST00000304076 HMGXB3Q12766 1538 aa29.43■■■□□ 2.3
VAV1-201ENST00000304076 ACIN1Q9UKV3 1341 aaKnown RBP29.38■■■□□ 2.29
VAV1-201ENST00000304076 NEUROD1Q13562 356 aa29.37■■■□□ 2.29
VAV1-201ENST00000304076 DIEXFQ68CQ4 756 aaKnown RBP29.35■■■□□ 2.29
VAV1-201ENST00000304076 CEP162Q5TB80 1403 aa29.34■■■□□ 2.29
VAV1-201ENST00000304076 WRNQ14191 1432 aaPredicted RBP eCLIP29.33■■■□□ 2.29
VAV1-201ENST00000304076 SOGA1O94964 1423 aa29.31■■■□□ 2.28
VAV1-201ENST00000304076 TNIKQ9UKE5 1360 aa29.21■■■□□ 2.27
VAV1-201ENST00000304076 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.26
VAV1-201ENST00000304076 CSRNP3Q8WYN3 585 aa29.17■■■□□ 2.26
VAV1-201ENST00000304076 RUSC2Q8N2Y8 1516 aa29.16■■■□□ 2.26
VAV1-201ENST00000304076 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
VAV1-201ENST00000304076 GTF3C3Q9Y5Q9 886 aa29.12■■■□□ 2.25
VAV1-201ENST00000304076 CENPBP07199 599 aaPredicted RBP29.1■■■□□ 2.25
VAV1-201ENST00000304076 EEA1Q15075 1411 aa29.02■■■□□ 2.24
VAV1-201ENST00000304076 ZNF316A6NFI3 1004 aaPredicted RBP28.97■■■□□ 2.23
VAV1-201ENST00000304076 GOLGA3Q08378 1498 aa28.94■■■□□ 2.22
VAV1-201ENST00000304076 CFTRP13569 1480 aa28.89■■■□□ 2.22
VAV1-201ENST00000304076 HNRNPUL2Q1KMD3 747 aaKnown RBP28.88■■■□□ 2.21
VAV1-201ENST00000304076 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
VAV1-201ENST00000304076 YTHDC1Q96MU7 727 aaKnown RBP28.8■■■□□ 2.2
VAV1-201ENST00000304076 NESP48681 1621 aa28.77■■■□□ 2.2
VAV1-201ENST00000304076 CEP164Q9UPV0 1460 aa28.71■■■□□ 2.19
VAV1-201ENST00000304076 CLIP1P30622 1438 aa28.7■■■□□ 2.18
VAV1-201ENST00000304076 SYNJ1O43426 1573 aa28.7■■■□□ 2.18
VAV1-201ENST00000304076 MIER1Q8N108 512 aa28.7■■■□□ 2.18
VAV1-201ENST00000304076 RANGAP1P46060 587 aaPredicted RBP28.65■■■□□ 2.18
VAV1-201ENST00000304076 PRDM2Q13029 1718 aa28.62■■■□□ 2.17
VAV1-201ENST00000304076 KIF21BO75037 1637 aa28.6■■■□□ 2.17
VAV1-201ENST00000304076 APLP2Q06481 763 aa28.59■■■□□ 2.17
VAV1-201ENST00000304076 VPS8Q8N3P4 1428 aa28.58■■■□□ 2.17
VAV1-201ENST00000304076 FANCD2Q9BXW9 1451 aa28.56■■■□□ 2.16
VAV1-201ENST00000304076 RAPGEF2Q9Y4G8 1499 aa28.54■■■□□ 2.16
VAV1-201ENST00000304076 LAMC3Q9Y6N6 1575 aa28.52■■■□□ 2.16
VAV1-201ENST00000304076 CUX1P39880 1505 aa28.52■■■□□ 2.16
VAV1-201ENST00000304076 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
VAV1-201ENST00000304076 BIVM-ERCC5R4GMW8 1640 aa28.42■■■□□ 2.14
VAV1-201ENST00000304076 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
VAV1-201ENST00000304076 KIF21AQ7Z4S6 1674 aa28.31■■■□□ 2.12
VAV1-201ENST00000304076 FGD5Q6ZNL6 1462 aa28.23■■■□□ 2.11
VAV1-201ENST00000304076 DHX57Q6P158 1386 aaKnown RBP28.22■■■□□ 2.11
VAV1-201ENST00000304076 TOPBP1Q92547 1522 aa28.22■■■□□ 2.11
VAV1-201ENST00000304076 KANK4Q5T7N3 995 aaPredicted RBP28.22■■■□□ 2.11
VAV1-201ENST00000304076 URB2Q14146 1524 aaKnown RBP28.21■■■□□ 2.11
VAV1-201ENST00000304076 DNMBPQ6XZF7 1577 aa28.19■■■□□ 2.1
VAV1-201ENST00000304076 CLSPNQ9HAW4 1339 aa28.15■■■□□ 2.1
VAV1-201ENST00000304076 ARAP1Q96P48 1450 aa28.14■■■□□ 2.1
VAV1-201ENST00000304076 MYT1Q01538 1121 aa28.14■■■□□ 2.1
VAV1-201ENST00000304076 PRXQ9BXM0 1461 aa28.11■■■□□ 2.09
VAV1-201ENST00000304076 POLA1P09884 1462 aaPredicted RBP28.1■■■□□ 2.09
VAV1-201ENST00000304076 RAD54L2Q9Y4B4 1467 aa28.1■■■□□ 2.09
VAV1-201ENST00000304076 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
VAV1-201ENST00000304076 CUX2O14529 1486 aa28.07■■■□□ 2.08
VAV1-201ENST00000304076 ERICH3Q5RHP9 1530 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms