Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRAF3IP1Q8TDR0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF3IP1Q8TDR0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF3IP1Q8TDR0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAF3IP1Q8TDR0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAF3IP1Q8TDR0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TRAF3IP1Q8TDR0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 AC093503.3-201ENST00000624917 2352 ntBASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 AC110285.5-201ENST00000611501 352 ntBASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF3IP1Q8TDR0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TRAF3IP1Q8TDR0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP1Q8TDR0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP1Q8TDR0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TRAF3IP1Q8TDR0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP1Q8TDR0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP1Q8TDR0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
TRAF3IP1Q8TDR0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TRAF3IP1Q8TDR0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP1Q8TDR0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.83■□□□□ 0.76
TRAF3IP1Q8TDR0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF3IP1Q8TDR0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 POU5F1P3-201ENST00000428824 1078 ntBASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 AC128676.1-201ENST00000454392 318 ntBASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 AC133681.1-201ENST00000465482 601 ntBASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 MIR4651-201ENST00000582622 73 ntBASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAF3IP1Q8TDR0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP1Q8TDR0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms