RNA–Protein interactions for RNA: ENST00000520728.5

PDP1-208, Transcript of pyruvate dehyrogenase phosphatase catalytic subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDP1-208ENST00000520728 NISCHQ9Y2I1 1504 aa41.16■■■■■ 4.18
PDP1-208ENST00000520728 CCDC180Q9P1Z9 1646 aa35.3■■■■□ 3.24
PDP1-208ENST00000520728 SHROOM4Q9ULL8 1493 aa34.69■■■■□ 3.14
PDP1-208ENST00000520728 ZCCHC6Q5VYS8 1495 aaKnown RBP34.68■■■■□ 3.14
PDP1-208ENST00000520728 DCAF8L2P0C7V8 631 aa34.4■■■■□ 3.1
PDP1-208ENST00000520728 DCAF1Q9Y4B6 1507 aa33.72■■■□□ 2.99
PDP1-208ENST00000520728 SUPT5HO00267 1087 aaKnown RBP33.68■■■□□ 2.98
PDP1-208ENST00000520728 ABCC9O60706 1549 aa33.33■■■□□ 2.93
PDP1-208ENST00000520728 SCRIBQ14160 1630 aa33.03■■■□□ 2.88
PDP1-208ENST00000520728 MYO15BQ96JP2 1530 aa32.99■■■□□ 2.87
PDP1-208ENST00000520728 NACADO15069 1562 aa32.78■■■□□ 2.84
PDP1-208ENST00000520728 RB1CC1Q8TDY2 1594 aa32.4■■■□□ 2.78
PDP1-208ENST00000520728 CHIC1Q5VXU3 224 aa32.39■■■□□ 2.78
PDP1-208ENST00000520728 RSF1Q96T23 1441 aaPredicted RBP32.33■■■□□ 2.77
PDP1-208ENST00000520728 CECR2Q9BXF3 1484 aa32.2■■■□□ 2.75
PDP1-208ENST00000520728 MROH2BQ7Z745 1585 aa32■■■□□ 2.71
PDP1-208ENST00000520728 UNC13AQ9UPW8 1703 aa31.99■■■□□ 2.71
PDP1-208ENST00000520728 WIZO95785 1651 aa31.82■■■□□ 2.68
PDP1-208ENST00000520728 PABPN1Q86U42 306 aaKnown RBP eCLIP31.75■■■□□ 2.67
PDP1-208ENST00000520728 BAZ1AQ9NRL2 1556 aaPredicted RBP31.66■■■□□ 2.66
PDP1-208ENST00000520728 BICRAQ9NZM4 1560 aa31.59■■■□□ 2.65
PDP1-208ENST00000520728 SMARCA4P51532 1647 aa31.5■■■□□ 2.63
PDP1-208ENST00000520728 LOC105371045A0A1W2PR82 267 aa31.46■■■□□ 2.63
PDP1-208ENST00000520728 TRIM41Q8WV44 630 aa31.39■■■□□ 2.62
PDP1-208ENST00000520728 TOP2AP11388 1531 aaKnown RBP31.25■■■□□ 2.59
PDP1-208ENST00000520728 FAM9AQ8IZU1 332 aaPredicted RBP31.17■■■□□ 2.58
PDP1-208ENST00000520728 CCDC88BA6NC98 1476 aa31.12■■■□□ 2.57
PDP1-208ENST00000520728 SMARCA2P51531 1590 aa31.08■■■□□ 2.57
PDP1-208ENST00000520728 EIF4G1Q04637 1599 aaKnown RBP31.04■■■□□ 2.56
PDP1-208ENST00000520728 EHMT2Q96KQ7 1210 aa30.97■■■□□ 2.55
PDP1-208ENST00000520728 PEG3Q9GZU2 1588 aa30.89■■■□□ 2.54
PDP1-208ENST00000520728 ABCC8Q09428 1581 aa30.88■■■□□ 2.53
PDP1-208ENST00000520728 ATAD2BQ9ULI0 1458 aa30.85■■■□□ 2.53
PDP1-208ENST00000520728 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
PDP1-208ENST00000520728 PCGF6Q9BYE7 350 aa30.73■■■□□ 2.51
PDP1-208ENST00000520728 SOGA1O94964 1423 aa30.43■■■□□ 2.46
PDP1-208ENST00000520728 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.45
PDP1-208ENST00000520728 RUSC2Q8N2Y8 1516 aa30.34■■■□□ 2.45
PDP1-208ENST00000520728 NCAPD3P42695 1498 aa30.34■■■□□ 2.45
PDP1-208ENST00000520728 SYNJ1O43426 1573 aa30.29■■■□□ 2.44
PDP1-208ENST00000520728 HMGXB3Q12766 1538 aa30.28■■■□□ 2.44
PDP1-208ENST00000520728 TRIM26Q12899 539 aaPredicted RBP30.23■■■□□ 2.43
PDP1-208ENST00000520728 HRCP23327 699 aa30.18■■■□□ 2.42
PDP1-208ENST00000520728 CSRNP3Q8WYN3 585 aa30.15■■■□□ 2.42
PDP1-208ENST00000520728 PPARGC1BQ86YN6 1023 aaKnown RBP30.12■■■□□ 2.41
PDP1-208ENST00000520728 EEA1Q15075 1411 aa30.05■■■□□ 2.4
PDP1-208ENST00000520728 UBTFP17480 764 aaKnown RBP30.01■■■□□ 2.39
PDP1-208ENST00000520728 CC2D2AQ9P2K1 1620 aa30■■■□□ 2.39
PDP1-208ENST00000520728 TOP2BQ02880 1626 aa29.94■■■□□ 2.38
PDP1-208ENST00000520728 CEP162Q5TB80 1403 aa29.94■■■□□ 2.38
PDP1-208ENST00000520728 CFTRP13569 1480 aa29.93■■■□□ 2.38
PDP1-208ENST00000520728 TNIKQ9UKE5 1360 aa29.9■■■□□ 2.38
PDP1-208ENST00000520728 GOLGA3Q08378 1498 aa29.87■■■□□ 2.37
PDP1-208ENST00000520728 BIVM-ERCC5R4GMW8 1640 aa29.84■■■□□ 2.37
PDP1-208ENST00000520728 CUX1P39880 1505 aa29.83■■■□□ 2.37
PDP1-208ENST00000520728 TTBK1Q5TCY1 1321 aaPredicted RBP29.78■■■□□ 2.36
PDP1-208ENST00000520728 CEP164Q9UPV0 1460 aa29.77■■■□□ 2.36
PDP1-208ENST00000520728 CADPSQ9ULU8 1353 aa29.72■■■□□ 2.35
PDP1-208ENST00000520728 KIF21BO75037 1637 aa29.72■■■□□ 2.35
PDP1-208ENST00000520728 RAPGEF2Q9Y4G8 1499 aa29.72■■■□□ 2.35
PDP1-208ENST00000520728 RANGAP1P46060 587 aaPredicted RBP29.67■■■□□ 2.34
PDP1-208ENST00000520728 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
PDP1-208ENST00000520728 CLIP1P30622 1438 aa29.53■■■□□ 2.32
PDP1-208ENST00000520728 DNAJC5BQ9UF47 199 aa29.52■■■□□ 2.32
PDP1-208ENST00000520728 NESP48681 1621 aa29.51■■■□□ 2.32
PDP1-208ENST00000520728 KIF27Q86VH2 1401 aa29.49■■■□□ 2.31
PDP1-208ENST00000520728 PRXQ9BXM0 1461 aa29.46■■■□□ 2.31
PDP1-208ENST00000520728 FANCD2Q9BXW9 1451 aa29.45■■■□□ 2.31
PDP1-208ENST00000520728 FGD5Q6ZNL6 1462 aa29.4■■■□□ 2.3
PDP1-208ENST00000520728 CUX2O14529 1486 aa29.38■■■□□ 2.29
PDP1-208ENST00000520728 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
PDP1-208ENST00000520728 VPS8Q8N3P4 1428 aa29.29■■■□□ 2.28
PDP1-208ENST00000520728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.26■■■□□ 2.27
PDP1-208ENST00000520728 IGF1RP08069 1367 aa29.25■■■□□ 2.27
PDP1-208ENST00000520728 RAD54L2Q9Y4B4 1467 aa29.21■■■□□ 2.27
PDP1-208ENST00000520728 TOPBP1Q92547 1522 aa29.19■■■□□ 2.26
PDP1-208ENST00000520728 DNMBPQ6XZF7 1577 aa29.18■■■□□ 2.26
PDP1-208ENST00000520728 ZEB1P37275 1124 aaPredicted RBP29.17■■■□□ 2.26
PDP1-208ENST00000520728 LAMC3Q9Y6N6 1575 aa29.16■■■□□ 2.26
PDP1-208ENST00000520728 POLA1P09884 1462 aaPredicted RBP29.14■■■□□ 2.26
PDP1-208ENST00000520728 ARAP1Q96P48 1450 aa29.14■■■□□ 2.26
PDP1-208ENST00000520728 APLP2Q06481 763 aa29.13■■■□□ 2.25
PDP1-208ENST00000520728 CARMIL1Q5VZK9 1371 aa29.11■■■□□ 2.25
PDP1-208ENST00000520728 CCER1Q8TC90 406 aaPredicted RBP29.08■■■□□ 2.25
PDP1-208ENST00000520728 URB2Q14146 1524 aaKnown RBP29.08■■■□□ 2.25
PDP1-208ENST00000520728 ARHGAP35Q9NRY4 1499 aa29.01■■■□□ 2.24
PDP1-208ENST00000520728 ABCA10Q8WWZ4 1543 aa29■■■□□ 2.23
PDP1-208ENST00000520728 KIF21AQ7Z4S6 1674 aa29■■■□□ 2.23
PDP1-208ENST00000520728 PDS5BQ9NTI5 1447 aa28.99■■■□□ 2.23
PDP1-208ENST00000520728 HNRNPUL2Q1KMD3 747 aaKnown RBP28.96■■■□□ 2.23
PDP1-208ENST00000520728 KANK4Q5T7N3 995 aaPredicted RBP28.94■■■□□ 2.22
PDP1-208ENST00000520728 TDRD9Q8NDG6 1382 aaKnown RBP28.9■■■□□ 2.22
PDP1-208ENST00000520728 P3H3Q8IVL6 736 aa28.85■■■□□ 2.21
PDP1-208ENST00000520728 WDR97A6NE52 1622 aa28.82■■■□□ 2.2
PDP1-208ENST00000520728 CUL7Q14999 1698 aa28.73■■■□□ 2.19
PDP1-208ENST00000520728 GAPVD1Q14C86 1478 aa28.72■■■□□ 2.19
PDP1-208ENST00000520728 ABCA5Q8WWZ7 1642 aa28.72■■■□□ 2.19
PDP1-208ENST00000520728 TARBP1Q13395 1621 aaKnown RBP28.66■■■□□ 2.18
PDP1-208ENST00000520728 ATP1B4Q9UN42 357 aaPredicted RBP28.65■■■□□ 2.18
PDP1-208ENST00000520728 FHOD3Q2V2M9 1422 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms