RNA–Protein interactions for RNA: ENST00000541224.5

ACVR1B-205, Transcript of activin A receptor type 1B, humanhuman

TSL 2 BASIC

Gene ACVR1B, Length 1,791 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACVR1B-205ENST00000541224 NISCHQ9Y2I1 1504 aa42.83■■■■■ 4.45
ACVR1B-205ENST00000541224 ABCC9O60706 1549 aa38.79■■■■□ 3.8
ACVR1B-205ENST00000541224 CCDC180Q9P1Z9 1646 aa38.65■■■■□ 3.78
ACVR1B-205ENST00000541224 RB1CC1Q8TDY2 1594 aa36.9■■■■□ 3.5
ACVR1B-205ENST00000541224 NACADO15069 1562 aa36.57■■■■□ 3.44
ACVR1B-205ENST00000541224 DNAJC5BQ9UF47 199 aa36.55■■■■□ 3.44
ACVR1B-205ENST00000541224 DCAF8L2P0C7V8 631 aa36.21■■■■□ 3.39
ACVR1B-205ENST00000541224 UNC13AQ9UPW8 1703 aa36.04■■■■□ 3.36
ACVR1B-205ENST00000541224 PABPN1Q86U42 306 aaKnown RBP eCLIP36.02■■■■□ 3.36
ACVR1B-205ENST00000541224 MYO15BQ96JP2 1530 aa35.99■■■■□ 3.35
ACVR1B-205ENST00000541224 BICRAQ9NZM4 1560 aa35.76■■■■□ 3.31
ACVR1B-205ENST00000541224 ZCCHC6Q5VYS8 1495 aaKnown RBP35.44■■■■□ 3.26
ACVR1B-205ENST00000541224 DCAF1Q9Y4B6 1507 aa35.42■■■■□ 3.26
ACVR1B-205ENST00000541224 SHROOM4Q9ULL8 1493 aa35.36■■■■□ 3.25
ACVR1B-205ENST00000541224 SCRIBQ14160 1630 aa35.11■■■■□ 3.21
ACVR1B-205ENST00000541224 CC2D2AQ9P2K1 1620 aa35.07■■■■□ 3.2
ACVR1B-205ENST00000541224 CECR2Q9BXF3 1484 aa35■■■■□ 3.19
ACVR1B-205ENST00000541224 EIF4G1Q04637 1599 aaKnown RBP34.93■■■■□ 3.18
ACVR1B-205ENST00000541224 DNAJC5Q9H3Z4 198 aa33.85■■■■□ 3.01
ACVR1B-205ENST00000541224 NCAPD3P42695 1498 aa33.72■■■□□ 2.99
ACVR1B-205ENST00000541224 CUX2O14529 1486 aa33.63■■■□□ 2.97
ACVR1B-205ENST00000541224 ERCC6Q03468 1493 aa33.57■■■□□ 2.96
ACVR1B-205ENST00000541224 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
ACVR1B-205ENST00000541224 SMARCA2P51531 1590 aa33.52■■■□□ 2.96
ACVR1B-205ENST00000541224 SMARCA4P51532 1647 aa33.49■■■□□ 2.95
ACVR1B-205ENST00000541224 HMGXB3Q12766 1538 aa33.49■■■□□ 2.95
ACVR1B-205ENST00000541224 SUPT5HO00267 1087 aaKnown RBP33.47■■■□□ 2.95
ACVR1B-205ENST00000541224 BAZ1AQ9NRL2 1556 aaPredicted RBP33.31■■■□□ 2.92
ACVR1B-205ENST00000541224 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
ACVR1B-205ENST00000541224 NESP48681 1621 aa33.22■■■□□ 2.91
ACVR1B-205ENST00000541224 PEG3Q9GZU2 1588 aa33.19■■■□□ 2.9
ACVR1B-205ENST00000541224 LAMC3Q9Y6N6 1575 aa33.06■■■□□ 2.88
ACVR1B-205ENST00000541224 THOC2Q8NI27 1593 aaKnown RBP33.01■■■□□ 2.88
ACVR1B-205ENST00000541224 MROH2BQ7Z745 1585 aa32.96■■■□□ 2.87
ACVR1B-205ENST00000541224 KIF21AQ7Z4S6 1674 aa32.86■■■□□ 2.85
ACVR1B-205ENST00000541224 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
ACVR1B-205ENST00000541224 RSF1Q96T23 1441 aaPredicted RBP32.73■■■□□ 2.83
ACVR1B-205ENST00000541224 CADPSQ9ULU8 1353 aa32.67■■■□□ 2.82
ACVR1B-205ENST00000541224 WIZO95785 1651 aa32.58■■■□□ 2.81
ACVR1B-205ENST00000541224 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
ACVR1B-205ENST00000541224 WDR62O43379 1518 aa32.51■■■□□ 2.79
ACVR1B-205ENST00000541224 CEP164Q9UPV0 1460 aa32.39■■■□□ 2.78
ACVR1B-205ENST00000541224 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
ACVR1B-205ENST00000541224 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
ACVR1B-205ENST00000541224 CFTRP13569 1480 aa32.25■■■□□ 2.75
ACVR1B-205ENST00000541224 TRIM41Q8WV44 630 aa32.23■■■□□ 2.75
ACVR1B-205ENST00000541224 TOP2AP11388 1531 aaKnown RBP32.18■■■□□ 2.74
ACVR1B-205ENST00000541224 URB2Q14146 1524 aaKnown RBP32.04■■■□□ 2.72
ACVR1B-205ENST00000541224 PRDM2Q13029 1718 aa32.01■■■□□ 2.71
ACVR1B-205ENST00000541224 OSCARQ8IYS5 282 aa32.01■■■□□ 2.71
ACVR1B-205ENST00000541224 CCDC88BA6NC98 1476 aa31.77■■■□□ 2.68
ACVR1B-205ENST00000541224 IFT140Q96RY7 1462 aa31.77■■■□□ 2.68
ACVR1B-205ENST00000541224 TOPBP1Q92547 1522 aa31.67■■■□□ 2.66
ACVR1B-205ENST00000541224 ZNF608Q9ULD9 1512 aaPredicted RBP31.67■■■□□ 2.66
ACVR1B-205ENST00000541224 ABCC8Q09428 1581 aa31.65■■■□□ 2.66
ACVR1B-205ENST00000541224 RIMBP3CA6NJZ7 1639 aa31.63■■■□□ 2.65
ACVR1B-205ENST00000541224 RIMBP3BA6NNM3 1639 aa31.63■■■□□ 2.65
ACVR1B-205ENST00000541224 RIMBP3Q9UFD9 1639 aa31.63■■■□□ 2.65
ACVR1B-205ENST00000541224 DNMBPQ6XZF7 1577 aa31.56■■■□□ 2.64
ACVR1B-205ENST00000541224 EIF4G3O43432 1585 aaKnown RBP31.55■■■□□ 2.64
ACVR1B-205ENST00000541224 ARHGEF11O15085 1522 aa31.49■■■□□ 2.63
ACVR1B-205ENST00000541224 TARBP1Q13395 1621 aaKnown RBP31.41■■■□□ 2.62
ACVR1B-205ENST00000541224 CHD1O14646 1710 aa31.38■■■□□ 2.61
ACVR1B-205ENST00000541224 AQRO60306 1485 aaKnown RBP eCLIP31.35■■■□□ 2.61
ACVR1B-205ENST00000541224 POLA1P09884 1462 aaPredicted RBP31.32■■■□□ 2.6
ACVR1B-205ENST00000541224 CYB5RLQ6IPT4 315 aa31.23■■■□□ 2.59
ACVR1B-205ENST00000541224 FBLN2P98095 1184 aa31.21■■■□□ 2.59
ACVR1B-205ENST00000541224 RAD54L2Q9Y4B4 1467 aa31.18■■■□□ 2.58
ACVR1B-205ENST00000541224 WDR97A6NE52 1622 aa31.17■■■□□ 2.58
ACVR1B-205ENST00000541224 SOGA1O94964 1423 aa31.17■■■□□ 2.58
ACVR1B-205ENST00000541224 ARAP1Q96P48 1450 aa31.14■■■□□ 2.58
ACVR1B-205ENST00000541224 TDRD9Q8NDG6 1382 aaKnown RBP31.11■■■□□ 2.57
ACVR1B-205ENST00000541224 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
ACVR1B-205ENST00000541224 SNAPC4Q5SXM2 1469 aa31.06■■■□□ 2.56
ACVR1B-205ENST00000541224 LOC105371045A0A1W2PR82 267 aa31.04■■■□□ 2.56
ACVR1B-205ENST00000541224 MAGI1Q96QZ7 1491 aaPredicted RBP31.01■■■□□ 2.55
ACVR1B-205ENST00000541224 TRHP20396 242 aaPredicted RBP31■■■□□ 2.55
ACVR1B-205ENST00000541224 CUX1P39880 1505 aa30.99■■■□□ 2.55
ACVR1B-205ENST00000541224 SYNJ1O43426 1573 aa30.99■■■□□ 2.55
ACVR1B-205ENST00000541224 CLASP1Q7Z460 1538 aa30.99■■■□□ 2.55
ACVR1B-205ENST00000541224 CHMP7Q8WUX9 453 aaPredicted RBP30.97■■■□□ 2.55
ACVR1B-205ENST00000541224 GRIN2BQ13224 1484 aa30.96■■■□□ 2.55
ACVR1B-205ENST00000541224 FAM9AQ8IZU1 332 aaPredicted RBP30.89■■■□□ 2.54
ACVR1B-205ENST00000541224 SYNJ2O15056 1496 aa30.89■■■□□ 2.54
ACVR1B-205ENST00000541224 PBRM1Q86U86 1689 aa30.85■■■□□ 2.53
ACVR1B-205ENST00000541224 WRNQ14191 1432 aaPredicted RBP eCLIP30.82■■■□□ 2.52
ACVR1B-205ENST00000541224 GAPVD1Q14C86 1478 aa30.8■■■□□ 2.52
ACVR1B-205ENST00000541224 ABCA10Q8WWZ4 1543 aa30.74■■■□□ 2.51
ACVR1B-205ENST00000541224 ABCA5Q8WWZ7 1642 aa30.73■■■□□ 2.51
ACVR1B-205ENST00000541224 EEA1Q15075 1411 aa30.62■■■□□ 2.49
ACVR1B-205ENST00000541224 BIVM-ERCC5R4GMW8 1640 aa30.6■■■□□ 2.49
ACVR1B-205ENST00000541224 TOP2BQ02880 1626 aa30.59■■■□□ 2.49
ACVR1B-205ENST00000541224 GRIN2AQ12879 1464 aa30.55■■■□□ 2.48
ACVR1B-205ENST00000541224 ADAMTS12P58397 1594 aa30.51■■■□□ 2.47
ACVR1B-205ENST00000541224 EHMT2Q96KQ7 1210 aa30.46■■■□□ 2.47
ACVR1B-205ENST00000541224 NUP160Q12769 1436 aa30.45■■■□□ 2.47
ACVR1B-205ENST00000541224 RUSC2Q8N2Y8 1516 aa30.45■■■□□ 2.46
ACVR1B-205ENST00000541224 CEP170Q5SW79 1584 aa30.45■■■□□ 2.46
ACVR1B-205ENST00000541224 ERCC6L2Q5T890 1561 aa30.42■■■□□ 2.46
ACVR1B-205ENST00000541224 FHAD1B1AJZ9 1412 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms