Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD47Q08722 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.68■□□□□ 0.42
CD47Q08722 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.68■□□□□ 0.42
CD47Q08722 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD47Q08722 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.68■□□□□ 0.42
CD47Q08722 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.68■□□□□ 0.42
CD47Q08722 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CD47Q08722 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CD47Q08722 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.68■□□□□ 0.42
CD47Q08722 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD47Q08722 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD47Q08722 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.67■□□□□ 0.42
CD47Q08722 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.67■□□□□ 0.42
CD47Q08722 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD47Q08722 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD47Q08722 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD47Q08722 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CD47Q08722 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.67■□□□□ 0.42
CD47Q08722 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD47Q08722 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD47Q08722 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD47Q08722 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD47Q08722 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.67■□□□□ 0.42
CD47Q08722 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD47Q08722 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.67■□□□□ 0.42
CD47Q08722 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.67■□□□□ 0.42
CD47Q08722 DUSP5P2-201ENST00000426873 1033 ntBASIC17.67■□□□□ 0.42
CD47Q08722 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.67■□□□□ 0.42
CD47Q08722 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.67■□□□□ 0.42
CD47Q08722 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.67■□□□□ 0.42
CD47Q08722 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.67■□□□□ 0.42
CD47Q08722 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.67■□□□□ 0.42
CD47Q08722 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.67■□□□□ 0.42
CD47Q08722 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
CD47Q08722 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.67■□□□□ 0.42
CD47Q08722 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD47Q08722 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CD47Q08722 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD47Q08722 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.67■□□□□ 0.42
CD47Q08722 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.67■□□□□ 0.42
CD47Q08722 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD47Q08722 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CD47Q08722 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CD47Q08722 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.66■□□□□ 0.42
CD47Q08722 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.66■□□□□ 0.42
CD47Q08722 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.66■□□□□ 0.42
CD47Q08722 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.66■□□□□ 0.42
CD47Q08722 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.66■□□□□ 0.42
CD47Q08722 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CD47Q08722 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.66■□□□□ 0.42
CD47Q08722 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CD47Q08722 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
CD47Q08722 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD47Q08722 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CD47Q08722 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CD47Q08722 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.65■□□□□ 0.42
CD47Q08722 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.65■□□□□ 0.42
CD47Q08722 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD47Q08722 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms