RNA–Protein interactions for RNA: ENST00000622220.1

RNFT2-209, Transcript of ring finger protein, transmembrane 2, humanhuman

TSL 5 BASIC

Gene RNFT2, Length 2,176 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2-209ENST00000622220 NISCHQ9Y2I1 1504 aa38.75■■■■□ 3.79
RNFT2-209ENST00000622220 CCDC180Q9P1Z9 1646 aa33.24■■■□□ 2.91
RNFT2-209ENST00000622220 ZCCHC6Q5VYS8 1495 aaKnown RBP32.74■■■□□ 2.83
RNFT2-209ENST00000622220 SHROOM4Q9ULL8 1493 aa32.45■■■□□ 2.78
RNFT2-209ENST00000622220 DCAF1Q9Y4B6 1507 aa31.99■■■□□ 2.71
RNFT2-209ENST00000622220 DCAF8L2P0C7V8 631 aa31.85■■■□□ 2.69
RNFT2-209ENST00000622220 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.67
RNFT2-209ENST00000622220 MYO15BQ96JP2 1530 aa31.22■■■□□ 2.59
RNFT2-209ENST00000622220 ABCC9O60706 1549 aa31.04■■■□□ 2.56
RNFT2-209ENST00000622220 CHIC1Q5VXU3 224 aa30.9■■■□□ 2.54
RNFT2-209ENST00000622220 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
RNFT2-209ENST00000622220 NACADO15069 1562 aa30.76■■■□□ 2.51
RNFT2-209ENST00000622220 RSF1Q96T23 1441 aaPredicted RBP30.49■■■□□ 2.47
RNFT2-209ENST00000622220 RB1CC1Q8TDY2 1594 aa30.26■■■□□ 2.43
RNFT2-209ENST00000622220 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
RNFT2-209ENST00000622220 MROH2BQ7Z745 1585 aa30■■■□□ 2.39
RNFT2-209ENST00000622220 BAZ1AQ9NRL2 1556 aaPredicted RBP29.83■■■□□ 2.37
RNFT2-209ENST00000622220 WIZO95785 1651 aa29.81■■■□□ 2.36
RNFT2-209ENST00000622220 LOC105371045A0A1W2PR82 267 aa29.8■■■□□ 2.36
RNFT2-209ENST00000622220 TRIM41Q8WV44 630 aa29.76■■■□□ 2.35
RNFT2-209ENST00000622220 UNC13AQ9UPW8 1703 aa29.7■■■□□ 2.35
RNFT2-209ENST00000622220 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
RNFT2-209ENST00000622220 PCGF6Q9BYE7 350 aa29.54■■■□□ 2.32
RNFT2-209ENST00000622220 HRCP23327 699 aa29.5■■■□□ 2.31
RNFT2-209ENST00000622220 TOP2AP11388 1531 aaKnown RBP29.48■■■□□ 2.31
RNFT2-209ENST00000622220 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.3
RNFT2-209ENST00000622220 BICRAQ9NZM4 1560 aa29.34■■■□□ 2.29
RNFT2-209ENST00000622220 FAM9AQ8IZU1 332 aaPredicted RBP29.28■■■□□ 2.28
RNFT2-209ENST00000622220 CCDC88BA6NC98 1476 aa29.25■■■□□ 2.27
RNFT2-209ENST00000622220 TRIM26Q12899 539 aaPredicted RBP29.25■■■□□ 2.27
RNFT2-209ENST00000622220 SMARCA2P51531 1590 aa29.25■■■□□ 2.27
RNFT2-209ENST00000622220 PABPN1Q86U42 306 aaKnown RBP eCLIP29.2■■■□□ 2.26
RNFT2-209ENST00000622220 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
RNFT2-209ENST00000622220 ABCC8Q09428 1581 aa28.98■■■□□ 2.23
RNFT2-209ENST00000622220 EHMT2Q96KQ7 1210 aa28.86■■■□□ 2.21
RNFT2-209ENST00000622220 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
RNFT2-209ENST00000622220 EEA1Q15075 1411 aa28.78■■■□□ 2.2
RNFT2-209ENST00000622220 BAZ1BQ9UIG0 1483 aaKnown RBP28.75■■■□□ 2.19
RNFT2-209ENST00000622220 SOGA1O94964 1423 aa28.67■■■□□ 2.18
RNFT2-209ENST00000622220 WRNQ14191 1432 aaPredicted RBP eCLIP28.67■■■□□ 2.18
RNFT2-209ENST00000622220 PPARGC1BQ86YN6 1023 aaKnown RBP28.65■■■□□ 2.18
RNFT2-209ENST00000622220 ZEB1P37275 1124 aaPredicted RBP28.63■■■□□ 2.17
RNFT2-209ENST00000622220 CSRNP3Q8WYN3 585 aa28.6■■■□□ 2.17
RNFT2-209ENST00000622220 TNIKQ9UKE5 1360 aa28.57■■■□□ 2.16
RNFT2-209ENST00000622220 RUSC2Q8N2Y8 1516 aa28.49■■■□□ 2.15
RNFT2-209ENST00000622220 CEP162Q5TB80 1403 aa28.49■■■□□ 2.15
RNFT2-209ENST00000622220 SYNJ1O43426 1573 aa28.48■■■□□ 2.15
RNFT2-209ENST00000622220 GOLGA3Q08378 1498 aa28.44■■■□□ 2.14
RNFT2-209ENST00000622220 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
RNFT2-209ENST00000622220 NCAPD3P42695 1498 aa28.42■■■□□ 2.14
RNFT2-209ENST00000622220 UBTFP17480 764 aaKnown RBP28.36■■■□□ 2.13
RNFT2-209ENST00000622220 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
RNFT2-209ENST00000622220 KIF21BO75037 1637 aa28.33■■■□□ 2.13
RNFT2-209ENST00000622220 TOP2BQ02880 1626 aa28.28■■■□□ 2.12
RNFT2-209ENST00000622220 BIVM-ERCC5R4GMW8 1640 aa28.21■■■□□ 2.11
RNFT2-209ENST00000622220 CFTRP13569 1480 aa28.08■■■□□ 2.09
RNFT2-209ENST00000622220 CC2D2AQ9P2K1 1620 aa28.06■■■□□ 2.08
RNFT2-209ENST00000622220 CLIP1P30622 1438 aa28.05■■■□□ 2.08
RNFT2-209ENST00000622220 RAPGEF2Q9Y4G8 1499 aa28.02■■■□□ 2.08
RNFT2-209ENST00000622220 CUX1P39880 1505 aa27.97■■■□□ 2.07
RNFT2-209ENST00000622220 ERICH3Q5RHP9 1530 aa27.96■■■□□ 2.07
RNFT2-209ENST00000622220 CCER1Q8TC90 406 aaPredicted RBP27.94■■■□□ 2.06
RNFT2-209ENST00000622220 VPS8Q8N3P4 1428 aa27.93■■■□□ 2.06
RNFT2-209ENST00000622220 PRDM2Q13029 1718 aa27.93■■■□□ 2.06
RNFT2-209ENST00000622220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.93■■■□□ 2.06
RNFT2-209ENST00000622220 DNAJC5BQ9UF47 199 aa27.92■■■□□ 2.06
RNFT2-209ENST00000622220 PRXQ9BXM0 1461 aa27.91■■■□□ 2.06
RNFT2-209ENST00000622220 TTBK1Q5TCY1 1321 aaPredicted RBP27.9■■■□□ 2.06
RNFT2-209ENST00000622220 KIF27Q86VH2 1401 aa27.86■■■□□ 2.05
RNFT2-209ENST00000622220 CADPSQ9ULU8 1353 aa27.79■■■□□ 2.04
RNFT2-209ENST00000622220 APLP2Q06481 763 aa27.77■■■□□ 2.04
RNFT2-209ENST00000622220 RANGAP1P46060 587 aaPredicted RBP27.61■■■□□ 2.01
RNFT2-209ENST00000622220 ARAP1Q96P48 1450 aa27.6■■■□□ 2.01
RNFT2-209ENST00000622220 CUX2O14529 1486 aa27.55■■■□□ 2
RNFT2-209ENST00000622220 IGF1RP08069 1367 aa27.52■■■□□ 2
RNFT2-209ENST00000622220 FGD5Q6ZNL6 1462 aa27.52■■■□□ 2
RNFT2-209ENST00000622220 FANCD2Q9BXW9 1451 aa27.47■■□□□ 1.99
RNFT2-209ENST00000622220 HNRNPUL2Q1KMD3 747 aaKnown RBP27.47■■□□□ 1.99
RNFT2-209ENST00000622220 ARHGAP35Q9NRY4 1499 aa27.43■■□□□ 1.98
RNFT2-209ENST00000622220 CARMIL1Q5VZK9 1371 aa27.41■■□□□ 1.98
RNFT2-209ENST00000622220 DNMBPQ6XZF7 1577 aa27.38■■□□□ 1.97
RNFT2-209ENST00000622220 KANK4Q5T7N3 995 aaPredicted RBP27.31■■□□□ 1.96
RNFT2-209ENST00000622220 ABCA10Q8WWZ4 1543 aa27.28■■□□□ 1.96
RNFT2-209ENST00000622220 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
RNFT2-209ENST00000622220 RRBP1Q9P2E9 1410 aaKnown RBP27.27■■□□□ 1.96
RNFT2-209ENST00000622220 DIEXFQ68CQ4 756 aaKnown RBP27.26■■□□□ 1.95
RNFT2-209ENST00000622220 LAMC3Q9Y6N6 1575 aa27.26■■□□□ 1.95
RNFT2-209ENST00000622220 MAP3K1Q13233 1512 aa27.25■■□□□ 1.95
RNFT2-209ENST00000622220 POLA1P09884 1462 aaPredicted RBP27.24■■□□□ 1.95
RNFT2-209ENST00000622220 NESP48681 1621 aa27.22■■□□□ 1.95
RNFT2-209ENST00000622220 CLSPNQ9HAW4 1339 aa27.2■■□□□ 1.94
RNFT2-209ENST00000622220 ZNF316A6NFI3 1004 aaPredicted RBP27.2■■□□□ 1.94
RNFT2-209ENST00000622220 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
RNFT2-209ENST00000622220 CUL7Q14999 1698 aa27.15■■□□□ 1.94
RNFT2-209ENST00000622220 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.94
RNFT2-209ENST00000622220 TIAM1Q13009 1591 aa27.13■■□□□ 1.93
RNFT2-209ENST00000622220 CCNB3Q8WWL7 1395 aa27.12■■□□□ 1.93
RNFT2-209ENST00000622220 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
RNFT2-209ENST00000622220 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
RNFT2-209ENST00000622220 WDR97A6NE52 1622 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms