Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.41■□□□□ 0.38
CDC42P60953 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.41■□□□□ 0.38
CDC42P60953 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42P60953 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42P60953 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42P60953 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42P60953 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.41■□□□□ 0.38
CDC42P60953 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CDC42P60953 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42P60953 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42P60953 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42P60953 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42P60953 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDC42P60953 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42P60953 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42P60953 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42P60953 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42P60953 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDC42P60953 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDC42P60953 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.4■□□□□ 0.38
CDC42P60953 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42P60953 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.4■□□□□ 0.38
CDC42P60953 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.4■□□□□ 0.38
CDC42P60953 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42P60953 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42P60953 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.4■□□□□ 0.38
CDC42P60953 DUX4L16-201ENST00000555130 1264 ntBASIC17.4■□□□□ 0.38
CDC42P60953 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CDC42P60953 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CDC42P60953 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42P60953 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDC42P60953 AC020916.1-201ENST00000587762 1774 ntBASIC17.4■□□□□ 0.38
CDC42P60953 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDC42P60953 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC42P60953 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.39■□□□□ 0.38
CDC42P60953 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDC42P60953 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDC42P60953 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDC42P60953 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.39■□□□□ 0.37
CDC42P60953 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CDC42P60953 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.39■□□□□ 0.37
CDC42P60953 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDC42P60953 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
CDC42P60953 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.39■□□□□ 0.37
CDC42P60953 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CDC42P60953 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDC42P60953 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDC42P60953 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.39■□□□□ 0.37
CDC42P60953 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.39■□□□□ 0.37
CDC42P60953 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.39■□□□□ 0.37
CDC42P60953 OR10C1-204ENST00000622521 1039 ntBASIC17.39■□□□□ 0.37
CDC42P60953 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.39■□□□□ 0.37
CDC42P60953 AC083906.6-201ENST00000641366 219 ntBASIC17.39■□□□□ 0.37
CDC42P60953 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CDC42P60953 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDC42P60953 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDC42P60953 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42P60953 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.39■□□□□ 0.37
CDC42P60953 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.38■□□□□ 0.37
CDC42P60953 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.38■□□□□ 0.37
CDC42P60953 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.38■□□□□ 0.37
CDC42P60953 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.38■□□□□ 0.37
CDC42P60953 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDC42P60953 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms