Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 AL662844.1-201ENST00000546340 181 ntBASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 AL121912.1-201ENST00000603683 238 ntBASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.92■■□□□ 1.1
MS4A4AQ96JQ5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 SDHAP1-207ENST00000440850 2000 ntBASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 KRT16P4-201ENST00000453883 522 ntBASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A4AQ96JQ5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 AC073314.1-201ENST00000568729 2216 ntBASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 HLA-A-201ENST00000376802 1334 ntBASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 AC079776.4-201ENST00000511039 504 ntBASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.9■■□□□ 1.1
MS4A4AQ96JQ5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.89■■□□□ 1.1
MS4A4AQ96JQ5 AL162377.1-201ENST00000618844 1793 ntBASIC21.89■■□□□ 1.1
MS4A4AQ96JQ5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.89■■□□□ 1.1
MS4A4AQ96JQ5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
MS4A4AQ96JQ5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MS4A4AQ96JQ5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.89■■□□□ 1.1
MS4A4AQ96JQ5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MS4A4AQ96JQ5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
MS4A4AQ96JQ5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MS4A4AQ96JQ5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.1
MS4A4AQ96JQ5 Z83836.1-201ENST00000624605 1642 ntBASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 LINC00565-201ENST00000562710 2331 ntBASIC21.89■■□□□ 1.09
MS4A4AQ96JQ5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.88■■□□□ 1.09
MS4A4AQ96JQ5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A4AQ96JQ5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A4AQ96JQ5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
MS4A4AQ96JQ5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A4AQ96JQ5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A4AQ96JQ5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.88■■□□□ 1.09
MS4A4AQ96JQ5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A4AQ96JQ5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.88■■□□□ 1.09
MS4A4AQ96JQ5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms