RNA–Protein interactions for RNA: ENST00000544537.2

PRTN3-202, Transcript of proteinase 3, humanhuman

TSL 1 (best) BASIC

Gene PRTN3, Length 1,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRTN3-202ENST00000544537 NISCHQ9Y2I1 1504 aa44.4■■■■■ 4.7
PRTN3-202ENST00000544537 CCDC180Q9P1Z9 1646 aa39.4■■■■□ 3.9
PRTN3-202ENST00000544537 ABCC9O60706 1549 aa38.15■■■■□ 3.7
PRTN3-202ENST00000544537 ZCCHC6Q5VYS8 1495 aaKnown RBP37.07■■■■□ 3.53
PRTN3-202ENST00000544537 NACADO15069 1562 aa36.91■■■■□ 3.5
PRTN3-202ENST00000544537 RB1CC1Q8TDY2 1594 aa36.88■■■■□ 3.49
PRTN3-202ENST00000544537 DCAF8L2P0C7V8 631 aa36.88■■■■□ 3.49
PRTN3-202ENST00000544537 MYO15BQ96JP2 1530 aa36.78■■■■□ 3.48
PRTN3-202ENST00000544537 DCAF1Q9Y4B6 1507 aa36.75■■■■□ 3.47
PRTN3-202ENST00000544537 UNC13AQ9UPW8 1703 aa36.12■■■■□ 3.37
PRTN3-202ENST00000544537 SCRIBQ14160 1630 aa35.95■■■■□ 3.35
PRTN3-202ENST00000544537 BICRAQ9NZM4 1560 aa35.74■■■■□ 3.31
PRTN3-202ENST00000544537 PABPN1Q86U42 306 aaKnown RBP eCLIP35.65■■■■□ 3.3
PRTN3-202ENST00000544537 SHROOM4Q9ULL8 1493 aa35.4■■■■□ 3.26
PRTN3-202ENST00000544537 EIF4G1Q04637 1599 aaKnown RBP34.78■■■■□ 3.16
PRTN3-202ENST00000544537 DNAJC5BQ9UF47 199 aa34.63■■■■□ 3.13
PRTN3-202ENST00000544537 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
PRTN3-202ENST00000544537 CECR2Q9BXF3 1484 aa34.53■■■■□ 3.12
PRTN3-202ENST00000544537 SMARCA4P51532 1647 aa34.42■■■■□ 3.1
PRTN3-202ENST00000544537 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
PRTN3-202ENST00000544537 MROH2BQ7Z745 1585 aa34.22■■■■□ 3.07
PRTN3-202ENST00000544537 SMARCA2P51531 1590 aa34.11■■■■□ 3.05
PRTN3-202ENST00000544537 ATAD2BQ9ULI0 1458 aa34.09■■■■□ 3.05
PRTN3-202ENST00000544537 PEG3Q9GZU2 1588 aa34.06■■■■□ 3.04
PRTN3-202ENST00000544537 NCAPD3P42695 1498 aa34.01■■■■□ 3.03
PRTN3-202ENST00000544537 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
PRTN3-202ENST00000544537 RSF1Q96T23 1441 aaPredicted RBP33.92■■■■□ 3.02
PRTN3-202ENST00000544537 WIZO95785 1651 aa33.9■■■■□ 3.02
PRTN3-202ENST00000544537 BAZ1BQ9UIG0 1483 aaKnown RBP33.86■■■■□ 3.01
PRTN3-202ENST00000544537 TOP2AP11388 1531 aaKnown RBP33.57■■■□□ 2.96
PRTN3-202ENST00000544537 SUPT5HO00267 1087 aaKnown RBP33.29■■■□□ 2.92
PRTN3-202ENST00000544537 CCDC88BA6NC98 1476 aa33.12■■■□□ 2.89
PRTN3-202ENST00000544537 NESP48681 1621 aa33.11■■■□□ 2.89
PRTN3-202ENST00000544537 LAMC3Q9Y6N6 1575 aa33.11■■■□□ 2.89
PRTN3-202ENST00000544537 CADPSQ9ULU8 1353 aa33.03■■■□□ 2.88
PRTN3-202ENST00000544537 CFTRP13569 1480 aa32.93■■■□□ 2.86
PRTN3-202ENST00000544537 ERCC6Q03468 1493 aa32.86■■■□□ 2.85
PRTN3-202ENST00000544537 PRDM2Q13029 1718 aa32.84■■■□□ 2.85
PRTN3-202ENST00000544537 PDS5BQ9NTI5 1447 aa32.83■■■□□ 2.85
PRTN3-202ENST00000544537 KIF21AQ7Z4S6 1674 aa32.81■■■□□ 2.84
PRTN3-202ENST00000544537 FANCD2Q9BXW9 1451 aa32.68■■■□□ 2.82
PRTN3-202ENST00000544537 CEP164Q9UPV0 1460 aa32.63■■■□□ 2.81
PRTN3-202ENST00000544537 THOC2Q8NI27 1593 aaKnown RBP32.6■■■□□ 2.81
PRTN3-202ENST00000544537 MRC2Q9UBG0 1479 aa32.51■■■□□ 2.79
PRTN3-202ENST00000544537 WDR62O43379 1518 aa32.41■■■□□ 2.78
PRTN3-202ENST00000544537 CUX2O14529 1486 aa32.4■■■□□ 2.78
PRTN3-202ENST00000544537 URB2Q14146 1524 aaKnown RBP32.34■■■□□ 2.77
PRTN3-202ENST00000544537 DNMBPQ6XZF7 1577 aa32.23■■■□□ 2.75
PRTN3-202ENST00000544537 TOPBP1Q92547 1522 aa32.21■■■□□ 2.75
PRTN3-202ENST00000544537 ABCC8Q09428 1581 aa32.21■■■□□ 2.75
PRTN3-202ENST00000544537 CUX1P39880 1505 aa32.1■■■□□ 2.73
PRTN3-202ENST00000544537 WRNQ14191 1432 aaPredicted RBP eCLIP32■■■□□ 2.71
PRTN3-202ENST00000544537 POLA1P09884 1462 aaPredicted RBP31.96■■■□□ 2.71
PRTN3-202ENST00000544537 BIVM-ERCC5R4GMW8 1640 aa31.95■■■□□ 2.71
PRTN3-202ENST00000544537 FGD5Q6ZNL6 1462 aa31.94■■■□□ 2.7
PRTN3-202ENST00000544537 SYNJ1O43426 1573 aa31.94■■■□□ 2.7
PRTN3-202ENST00000544537 TOP2BQ02880 1626 aa31.93■■■□□ 2.7
PRTN3-202ENST00000544537 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
PRTN3-202ENST00000544537 TARBP1Q13395 1621 aaKnown RBP31.85■■■□□ 2.69
PRTN3-202ENST00000544537 RAD54L2Q9Y4B4 1467 aa31.8■■■□□ 2.68
PRTN3-202ENST00000544537 SOGA1O94964 1423 aa31.8■■■□□ 2.68
PRTN3-202ENST00000544537 ZNF608Q9ULD9 1512 aaPredicted RBP31.73■■■□□ 2.67
PRTN3-202ENST00000544537 WDR97A6NE52 1622 aa31.72■■■□□ 2.67
PRTN3-202ENST00000544537 EIF4G3O43432 1585 aaKnown RBP31.68■■■□□ 2.66
PRTN3-202ENST00000544537 ABCA10Q8WWZ4 1543 aa31.64■■■□□ 2.66
PRTN3-202ENST00000544537 AQRO60306 1485 aaKnown RBP eCLIP31.58■■■□□ 2.65
PRTN3-202ENST00000544537 TDRD9Q8NDG6 1382 aaKnown RBP31.56■■■□□ 2.64
PRTN3-202ENST00000544537 ABCA5Q8WWZ7 1642 aa31.53■■■□□ 2.64
PRTN3-202ENST00000544537 PBRM1Q86U86 1689 aa31.46■■■□□ 2.63
PRTN3-202ENST00000544537 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
PRTN3-202ENST00000544537 TRIM41Q8WV44 630 aa31.42■■■□□ 2.62
PRTN3-202ENST00000544537 GRIN2BQ13224 1484 aa31.41■■■□□ 2.62
PRTN3-202ENST00000544537 SNAPC4Q5SXM2 1469 aa31.33■■■□□ 2.61
PRTN3-202ENST00000544537 MAGI1Q96QZ7 1491 aaPredicted RBP31.31■■■□□ 2.6
PRTN3-202ENST00000544537 KIF27Q86VH2 1401 aa31.3■■■□□ 2.6
PRTN3-202ENST00000544537 ERICH3Q5RHP9 1530 aa31.27■■■□□ 2.6
PRTN3-202ENST00000544537 CHIC1Q5VXU3 224 aa31.26■■■□□ 2.59
PRTN3-202ENST00000544537 CHD1O14646 1710 aa31.25■■■□□ 2.59
PRTN3-202ENST00000544537 ADAMTS12P58397 1594 aa31.2■■■□□ 2.58
PRTN3-202ENST00000544537 SYNJ2O15056 1496 aa31.17■■■□□ 2.58
PRTN3-202ENST00000544537 FBLN2P98095 1184 aa31.11■■■□□ 2.57
PRTN3-202ENST00000544537 RUSC2Q8N2Y8 1516 aa31.11■■■□□ 2.57
PRTN3-202ENST00000544537 FHAD1B1AJZ9 1412 aa31.1■■■□□ 2.57
PRTN3-202ENST00000544537 DNAJC5Q9H3Z4 198 aa31.1■■■□□ 2.57
PRTN3-202ENST00000544537 CUL7Q14999 1698 aa31.09■■■□□ 2.57
PRTN3-202ENST00000544537 IGF1RP08069 1367 aa31.08■■■□□ 2.57
PRTN3-202ENST00000544537 CHMP7Q8WUX9 453 aaPredicted RBP31.08■■■□□ 2.57
PRTN3-202ENST00000544537 OSCARQ8IYS5 282 aa31.04■■■□□ 2.56
PRTN3-202ENST00000544537 GRIN2AQ12879 1464 aa31.02■■■□□ 2.56
PRTN3-202ENST00000544537 CARMIL1Q5VZK9 1371 aa30.93■■■□□ 2.54
PRTN3-202ENST00000544537 EEA1Q15075 1411 aa30.93■■■□□ 2.54
PRTN3-202ENST00000544537 CEP170Q5SW79 1584 aa30.88■■■□□ 2.53
PRTN3-202ENST00000544537 CLASP1Q7Z460 1538 aa30.87■■■□□ 2.53
PRTN3-202ENST00000544537 NUP160Q12769 1436 aa30.86■■■□□ 2.53
PRTN3-202ENST00000544537 RAPGEF2Q9Y4G8 1499 aa30.81■■■□□ 2.52
PRTN3-202ENST00000544537 CSRNP3Q8WYN3 585 aa30.79■■■□□ 2.52
PRTN3-202ENST00000544537 PRXQ9BXM0 1461 aa30.78■■■□□ 2.52
PRTN3-202ENST00000544537 FAM9AQ8IZU1 332 aaPredicted RBP30.77■■■□□ 2.52
PRTN3-202ENST00000544537 KIAA0586Q9BVV6 1533 aa30.63■■■□□ 2.49
PRTN3-202ENST00000544537 KIF21BO75037 1637 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms