RNA–Protein interactions for RNA: ENST00000380814.4

SLC46A3-202, Transcript of solute carrier family 46 member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC46A3, Length 2,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A3-202ENST00000380814 NISCHQ9Y2I1 1504 aa44.78■■■■■ 4.76
SLC46A3-202ENST00000380814 CCDC180Q9P1Z9 1646 aa38.78■■■■□ 3.8
SLC46A3-202ENST00000380814 ZCCHC6Q5VYS8 1495 aaKnown RBP37.75■■■■□ 3.63
SLC46A3-202ENST00000380814 DCAF1Q9Y4B6 1507 aa37.03■■■■□ 3.52
SLC46A3-202ENST00000380814 SHROOM4Q9ULL8 1493 aa36.95■■■■□ 3.51
SLC46A3-202ENST00000380814 DCAF8L2P0C7V8 631 aa36.74■■■■□ 3.47
SLC46A3-202ENST00000380814 MYO15BQ96JP2 1530 aa36.36■■■■□ 3.41
SLC46A3-202ENST00000380814 ABCC9O60706 1549 aa36.1■■■■□ 3.37
SLC46A3-202ENST00000380814 NACADO15069 1562 aa35.96■■■■□ 3.35
SLC46A3-202ENST00000380814 SUPT5HO00267 1087 aaKnown RBP35.85■■■■□ 3.33
SLC46A3-202ENST00000380814 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
SLC46A3-202ENST00000380814 RB1CC1Q8TDY2 1594 aa35.5■■■■□ 3.27
SLC46A3-202ENST00000380814 RSF1Q96T23 1441 aaPredicted RBP34.98■■■■□ 3.19
SLC46A3-202ENST00000380814 UNC13AQ9UPW8 1703 aa34.88■■■■□ 3.17
SLC46A3-202ENST00000380814 CECR2Q9BXF3 1484 aa34.75■■■■□ 3.15
SLC46A3-202ENST00000380814 CHIC1Q5VXU3 224 aa34.66■■■■□ 3.14
SLC46A3-202ENST00000380814 MROH2BQ7Z745 1585 aa34.63■■■■□ 3.13
SLC46A3-202ENST00000380814 BAZ1AQ9NRL2 1556 aaPredicted RBP34.53■■■■□ 3.12
SLC46A3-202ENST00000380814 BICRAQ9NZM4 1560 aa34.45■■■■□ 3.11
SLC46A3-202ENST00000380814 WIZO95785 1651 aa34.4■■■■□ 3.1
SLC46A3-202ENST00000380814 SMARCA4P51532 1647 aa34.31■■■■□ 3.08
SLC46A3-202ENST00000380814 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
SLC46A3-202ENST00000380814 TOP2AP11388 1531 aaKnown RBP34.04■■■■□ 3.04
SLC46A3-202ENST00000380814 PEG3Q9GZU2 1588 aa33.86■■■■□ 3.01
SLC46A3-202ENST00000380814 SMARCA2P51531 1590 aa33.75■■■□□ 2.99
SLC46A3-202ENST00000380814 EIF4G1Q04637 1599 aaKnown RBP33.74■■■□□ 2.99
SLC46A3-202ENST00000380814 CCDC88BA6NC98 1476 aa33.7■■■□□ 2.99
SLC46A3-202ENST00000380814 TRIM41Q8WV44 630 aa33.66■■■□□ 2.98
SLC46A3-202ENST00000380814 ATAD2BQ9ULI0 1458 aa33.58■■■□□ 2.97
SLC46A3-202ENST00000380814 HRCP23327 699 aa33.44■■■□□ 2.94
SLC46A3-202ENST00000380814 BAZ1BQ9UIG0 1483 aaKnown RBP33.42■■■□□ 2.94
SLC46A3-202ENST00000380814 LOC105371045A0A1W2PR82 267 aa33.35■■■□□ 2.93
SLC46A3-202ENST00000380814 ABCC8Q09428 1581 aa33.2■■■□□ 2.91
SLC46A3-202ENST00000380814 HMGXB3Q12766 1538 aa33.19■■■□□ 2.9
SLC46A3-202ENST00000380814 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
SLC46A3-202ENST00000380814 FAM9AQ8IZU1 332 aaPredicted RBP33.06■■■□□ 2.88
SLC46A3-202ENST00000380814 WRNQ14191 1432 aaPredicted RBP eCLIP32.9■■■□□ 2.86
SLC46A3-202ENST00000380814 SYNJ1O43426 1573 aa32.76■■■□□ 2.84
SLC46A3-202ENST00000380814 EEA1Q15075 1411 aa32.76■■■□□ 2.83
SLC46A3-202ENST00000380814 CC2D2AQ9P2K1 1620 aa32.7■■■□□ 2.83
SLC46A3-202ENST00000380814 SOGA1O94964 1423 aa32.69■■■□□ 2.82
SLC46A3-202ENST00000380814 CFTRP13569 1480 aa32.62■■■□□ 2.81
SLC46A3-202ENST00000380814 TOP2BQ02880 1626 aa32.58■■■□□ 2.81
SLC46A3-202ENST00000380814 EHMT2Q96KQ7 1210 aa32.57■■■□□ 2.8
SLC46A3-202ENST00000380814 BIVM-ERCC5R4GMW8 1640 aa32.55■■■□□ 2.8
SLC46A3-202ENST00000380814 PRDM2Q13029 1718 aa32.54■■■□□ 2.8
SLC46A3-202ENST00000380814 RUSC2Q8N2Y8 1516 aa32.54■■■□□ 2.8
SLC46A3-202ENST00000380814 PELP1Q8IZL8 1130 aaKnown RBP32.52■■■□□ 2.8
SLC46A3-202ENST00000380814 CSRNP3Q8WYN3 585 aa32.5■■■□□ 2.79
SLC46A3-202ENST00000380814 PCGF6Q9BYE7 350 aa32.49■■■□□ 2.79
SLC46A3-202ENST00000380814 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
SLC46A3-202ENST00000380814 TNIKQ9UKE5 1360 aa32.35■■■□□ 2.77
SLC46A3-202ENST00000380814 CUX1P39880 1505 aa32.34■■■□□ 2.77
SLC46A3-202ENST00000380814 GOLGA3Q08378 1498 aa32.34■■■□□ 2.77
SLC46A3-202ENST00000380814 KIF21BO75037 1637 aa32.32■■■□□ 2.76
SLC46A3-202ENST00000380814 TRIM26Q12899 539 aaPredicted RBP32.32■■■□□ 2.76
SLC46A3-202ENST00000380814 PPARGC1BQ86YN6 1023 aaKnown RBP32.32■■■□□ 2.76
SLC46A3-202ENST00000380814 CEP164Q9UPV0 1460 aa32.28■■■□□ 2.76
SLC46A3-202ENST00000380814 CEP162Q5TB80 1403 aa32.22■■■□□ 2.75
SLC46A3-202ENST00000380814 UBTFP17480 764 aaKnown RBP32.13■■■□□ 2.73
SLC46A3-202ENST00000380814 FANCD2Q9BXW9 1451 aa32.02■■■□□ 2.72
SLC46A3-202ENST00000380814 KIF27Q86VH2 1401 aa32.01■■■□□ 2.71
SLC46A3-202ENST00000380814 RAPGEF2Q9Y4G8 1499 aa32■■■□□ 2.71
SLC46A3-202ENST00000380814 ERICH3Q5RHP9 1530 aa31.98■■■□□ 2.71
SLC46A3-202ENST00000380814 PRXQ9BXM0 1461 aa31.96■■■□□ 2.71
SLC46A3-202ENST00000380814 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
SLC46A3-202ENST00000380814 NESP48681 1621 aa31.9■■■□□ 2.7
SLC46A3-202ENST00000380814 FGD5Q6ZNL6 1462 aa31.89■■■□□ 2.69
SLC46A3-202ENST00000380814 DNMBPQ6XZF7 1577 aa31.86■■■□□ 2.69
SLC46A3-202ENST00000380814 CLIP1P30622 1438 aa31.83■■■□□ 2.69
SLC46A3-202ENST00000380814 CUX2O14529 1486 aa31.79■■■□□ 2.68
SLC46A3-202ENST00000380814 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
SLC46A3-202ENST00000380814 ZEB1P37275 1124 aaPredicted RBP31.72■■■□□ 2.67
SLC46A3-202ENST00000380814 PDS5BQ9NTI5 1447 aa31.67■■■□□ 2.66
SLC46A3-202ENST00000380814 DNAJC5BQ9UF47 199 aa31.67■■■□□ 2.66
SLC46A3-202ENST00000380814 IGF1RP08069 1367 aa31.66■■■□□ 2.66
SLC46A3-202ENST00000380814 VPS8Q8N3P4 1428 aa31.65■■■□□ 2.66
SLC46A3-202ENST00000380814 POLA1P09884 1462 aaPredicted RBP31.64■■■□□ 2.66
SLC46A3-202ENST00000380814 ABCA10Q8WWZ4 1543 aa31.62■■■□□ 2.65
SLC46A3-202ENST00000380814 URB2Q14146 1524 aaKnown RBP31.6■■■□□ 2.65
SLC46A3-202ENST00000380814 KIF21AQ7Z4S6 1674 aa31.55■■■□□ 2.64
SLC46A3-202ENST00000380814 RAD54L2Q9Y4B4 1467 aa31.54■■■□□ 2.64
SLC46A3-202ENST00000380814 CARMIL1Q5VZK9 1371 aa31.51■■■□□ 2.64
SLC46A3-202ENST00000380814 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
SLC46A3-202ENST00000380814 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
SLC46A3-202ENST00000380814 SCAF1Q9H7N4 1312 aaKnown RBP31.44■■■□□ 2.62
SLC46A3-202ENST00000380814 RANGAP1P46060 587 aaPredicted RBP31.42■■■□□ 2.62
SLC46A3-202ENST00000380814 CUL7Q14999 1698 aa31.39■■■□□ 2.62
SLC46A3-202ENST00000380814 MYT1Q01538 1121 aa31.38■■■□□ 2.61
SLC46A3-202ENST00000380814 TTBK1Q5TCY1 1321 aaPredicted RBP31.34■■■□□ 2.61
SLC46A3-202ENST00000380814 ARHGAP35Q9NRY4 1499 aa31.34■■■□□ 2.61
SLC46A3-202ENST00000380814 ABCA5Q8WWZ7 1642 aa31.33■■■□□ 2.61
SLC46A3-202ENST00000380814 APLP2Q06481 763 aa31.31■■■□□ 2.6
SLC46A3-202ENST00000380814 TARBP1Q13395 1621 aaKnown RBP31.25■■■□□ 2.59
SLC46A3-202ENST00000380814 MRC2Q9UBG0 1479 aa31.24■■■□□ 2.59
SLC46A3-202ENST00000380814 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
SLC46A3-202ENST00000380814 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
SLC46A3-202ENST00000380814 CTTNBP2Q8WZ74 1663 aa31.15■■■□□ 2.58
SLC46A3-202ENST00000380814 WDR62O43379 1518 aa31.07■■■□□ 2.56
SLC46A3-202ENST00000380814 EFCAB5A4FU69 1503 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms