Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TTC9CQ8N5M4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.08■□□□□ 0
TTC9CQ8N5M4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 KSR1P1-201ENST00000446298 240 ntBASIC15.07■□□□□ 0
TTC9CQ8N5M4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 AC098818.2-201ENST00000564925 2320 ntBASIC15.07■□□□□ 0
TTC9CQ8N5M4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 IRX1P1-201ENST00000438849 1838 ntBASIC15.07■□□□□ 0
TTC9CQ8N5M4 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.07■□□□□ 0
TTC9CQ8N5M4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TTC9CQ8N5M4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
TTC9CQ8N5M4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 KRT8P41-201ENST00000533985 1514 ntBASIC15.06■□□□□ 0
TTC9CQ8N5M4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.06■□□□□ 0
TTC9CQ8N5M4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC9CQ8N5M4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.05■□□□□ 0
TTC9CQ8N5M4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TTC9CQ8N5M4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TTC9CQ8N5M4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.05■□□□□ 0
TTC9CQ8N5M4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
TTC9CQ8N5M4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TTC9CQ8N5M4 AL020996.1-203ENST00000536896 2307 ntBASIC15.05■□□□□ 0
TTC9CQ8N5M4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
TTC9CQ8N5M4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TTC9CQ8N5M4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TTC9CQ8N5M4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
TTC9CQ8N5M4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TTC9CQ8N5M4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ 0
TTC9CQ8N5M4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TTC9CQ8N5M4 PRORSD1P-201ENST00000295112 541 ntBASIC15.05■□□□□ -0
TTC9CQ8N5M4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 AC004980.1-204ENST00000429707 299 ntBASIC15.05■□□□□ -0
TTC9CQ8N5M4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.05■□□□□ -0
TTC9CQ8N5M4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms