RNA–Protein interactions for RNA: ENST00000356226.8

FGFR2-204, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best) BASIC

Gene FGFR2, Length 3,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-204ENST00000356226 NISCHQ9Y2I1 1504 aa37.85■■■■□ 3.65
FGFR2-204ENST00000356226 SHROOM4Q9ULL8 1493 aa34.54■■■■□ 3.12
FGFR2-204ENST00000356226 SUPT5HO00267 1087 aaKnown RBP34.18■■■■□ 3.06
FGFR2-204ENST00000356226 DCAF8L2P0C7V8 631 aa34.14■■■■□ 3.06
FGFR2-204ENST00000356226 PCGF6Q9BYE7 350 aa32.43■■■□□ 2.78
FGFR2-204ENST00000356226 EHMT2Q96KQ7 1210 aa32.35■■■□□ 2.77
FGFR2-204ENST00000356226 CHIC1Q5VXU3 224 aa32.31■■■□□ 2.76
FGFR2-204ENST00000356226 LOC105371045A0A1W2PR82 267 aa32.1■■■□□ 2.73
FGFR2-204ENST00000356226 FAM9AQ8IZU1 332 aaPredicted RBP31.92■■■□□ 2.7
FGFR2-204ENST00000356226 PPARGC1BQ86YN6 1023 aaKnown RBP31.91■■■□□ 2.7
FGFR2-204ENST00000356226 MYO15BQ96JP2 1530 aa31.86■■■□□ 2.69
FGFR2-204ENST00000356226 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
FGFR2-204ENST00000356226 HRCP23327 699 aa31.74■■■□□ 2.67
FGFR2-204ENST00000356226 TRIM41Q8WV44 630 aa31.31■■■□□ 2.6
FGFR2-204ENST00000356226 TTBK1Q5TCY1 1321 aaPredicted RBP31.21■■■□□ 2.59
FGFR2-204ENST00000356226 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
FGFR2-204ENST00000356226 TRIM26Q12899 539 aaPredicted RBP30.98■■■□□ 2.55
FGFR2-204ENST00000356226 SCRIBQ14160 1630 aa30.68■■■□□ 2.5
FGFR2-204ENST00000356226 ABCC9O60706 1549 aa30.67■■■□□ 2.5
FGFR2-204ENST00000356226 DCAF1Q9Y4B6 1507 aa30.44■■■□□ 2.46
FGFR2-204ENST00000356226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.43■■■□□ 2.46
FGFR2-204ENST00000356226 RSF1Q96T23 1441 aaPredicted RBP30.42■■■□□ 2.46
FGFR2-204ENST00000356226 RANGAP1P46060 587 aaPredicted RBP30.4■■■□□ 2.46
FGFR2-204ENST00000356226 CCER1Q8TC90 406 aaPredicted RBP30.36■■■□□ 2.45
FGFR2-204ENST00000356226 ZEB1P37275 1124 aaPredicted RBP30.21■■■□□ 2.43
FGFR2-204ENST00000356226 UBTFP17480 764 aaKnown RBP30.16■■■□□ 2.42
FGFR2-204ENST00000356226 CECR2Q9BXF3 1484 aa30.13■■■□□ 2.41
FGFR2-204ENST00000356226 RB1CC1Q8TDY2 1594 aa30.08■■■□□ 2.41
FGFR2-204ENST00000356226 PABPN1Q86U42 306 aaKnown RBP eCLIP30.06■■■□□ 2.4
FGFR2-204ENST00000356226 YTHDC1Q96MU7 727 aaKnown RBP29.8■■■□□ 2.36
FGFR2-204ENST00000356226 HNRNPUL2Q1KMD3 747 aaKnown RBP29.78■■■□□ 2.36
FGFR2-204ENST00000356226 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
FGFR2-204ENST00000356226 SCAF1Q9H7N4 1312 aaKnown RBP29.66■■■□□ 2.34
FGFR2-204ENST00000356226 DIEXFQ68CQ4 756 aaKnown RBP29.58■■■□□ 2.33
FGFR2-204ENST00000356226 WIZO95785 1651 aa29.56■■■□□ 2.32
FGFR2-204ENST00000356226 APLP2Q06481 763 aa29.54■■■□□ 2.32
FGFR2-204ENST00000356226 CSRNP3Q8WYN3 585 aa29.44■■■□□ 2.3
FGFR2-204ENST00000356226 ABCC8Q09428 1581 aa29.42■■■□□ 2.3
FGFR2-204ENST00000356226 NEUROD1Q13562 356 aa29.4■■■□□ 2.3
FGFR2-204ENST00000356226 SOGA1O94964 1423 aa29.35■■■□□ 2.29
FGFR2-204ENST00000356226 GTF3C3Q9Y5Q9 886 aa29.33■■■□□ 2.29
FGFR2-204ENST00000356226 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
FGFR2-204ENST00000356226 CENPBP07199 599 aaPredicted RBP29.3■■■□□ 2.28
FGFR2-204ENST00000356226 ITGAEP38570 1179 aa29.28■■■□□ 2.28
FGFR2-204ENST00000356226 NACADO15069 1562 aa29.26■■■□□ 2.27
FGFR2-204ENST00000356226 ACIN1Q9UKV3 1341 aaKnown RBP29.21■■■□□ 2.27
FGFR2-204ENST00000356226 CEP162Q5TB80 1403 aa29.2■■■□□ 2.26
FGFR2-204ENST00000356226 RUSC2Q8N2Y8 1516 aa29.16■■■□□ 2.26
FGFR2-204ENST00000356226 ATP1B4Q9UN42 357 aaPredicted RBP29.07■■■□□ 2.24
FGFR2-204ENST00000356226 ZNF316A6NFI3 1004 aaPredicted RBP29.02■■■□□ 2.24
FGFR2-204ENST00000356226 BAZ1AQ9NRL2 1556 aaPredicted RBP29.01■■■□□ 2.23
FGFR2-204ENST00000356226 MIER1Q8N108 512 aa28.91■■■□□ 2.22
FGFR2-204ENST00000356226 PELP1Q8IZL8 1130 aaKnown RBP28.86■■■□□ 2.21
FGFR2-204ENST00000356226 TNIKQ9UKE5 1360 aa28.84■■■□□ 2.21
FGFR2-204ENST00000356226 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
FGFR2-204ENST00000356226 CLIP1P30622 1438 aa28.73■■■□□ 2.19
FGFR2-204ENST00000356226 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
FGFR2-204ENST00000356226 P3H3Q8IVL6 736 aa28.67■■■□□ 2.18
FGFR2-204ENST00000356226 GOLGA3Q08378 1498 aa28.66■■■□□ 2.18
FGFR2-204ENST00000356226 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
FGFR2-204ENST00000356226 SMARCA2P51531 1590 aa28.64■■■□□ 2.17
FGFR2-204ENST00000356226 KANK4Q5T7N3 995 aaPredicted RBP28.52■■■□□ 2.16
FGFR2-204ENST00000356226 FAM50AQ14320 339 aaKnown RBP28.48■■■□□ 2.15
FGFR2-204ENST00000356226 EEA1Q15075 1411 aa28.44■■■□□ 2.14
FGFR2-204ENST00000356226 RAPGEF2Q9Y4G8 1499 aa28.44■■■□□ 2.14
FGFR2-204ENST00000356226 HIRIP3Q9BW71 556 aaPredicted RBP28.41■■■□□ 2.14
FGFR2-204ENST00000356226 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
FGFR2-204ENST00000356226 CEP164Q9UPV0 1460 aa28.4■■■□□ 2.14
FGFR2-204ENST00000356226 BCANQ96GW7 911 aa28.35■■■□□ 2.13
FGFR2-204ENST00000356226 VPS8Q8N3P4 1428 aa28.27■■■□□ 2.12
FGFR2-204ENST00000356226 EIF4G1Q04637 1599 aaKnown RBP28.25■■■□□ 2.11
FGFR2-204ENST00000356226 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
FGFR2-204ENST00000356226 ATAD2BQ9ULI0 1458 aa28.2■■■□□ 2.1
FGFR2-204ENST00000356226 DDX10Q13206 875 aaKnown RBP28.15■■■□□ 2.1
FGFR2-204ENST00000356226 ARID3CA6NKF2 412 aa28.14■■■□□ 2.09
FGFR2-204ENST00000356226 SIN3AQ96ST3 1273 aa28.13■■■□□ 2.09
FGFR2-204ENST00000356226 KCNH8Q96L42 1107 aa28.12■■■□□ 2.09
FGFR2-204ENST00000356226 CNGB1Q14028 1251 aaPredicted RBP28.12■■■□□ 2.09
FGFR2-204ENST00000356226 UNC13AQ9UPW8 1703 aa28.08■■■□□ 2.09
FGFR2-204ENST00000356226 BICRAQ9NZM4 1560 aa28■■■□□ 2.07
FGFR2-204ENST00000356226 DHX57Q6P158 1386 aaKnown RBP27.96■■■□□ 2.07
FGFR2-204ENST00000356226 KIF21BO75037 1637 aa27.95■■■□□ 2.06
FGFR2-204ENST00000356226 TRIM52Q96A61 297 aa27.93■■■□□ 2.06
FGFR2-204ENST00000356226 KIF27Q86VH2 1401 aa27.9■■■□□ 2.06
FGFR2-204ENST00000356226 CCNB3Q8WWL7 1395 aa27.86■■■□□ 2.05
FGFR2-204ENST00000356226 ARAP1Q96P48 1450 aa27.81■■■□□ 2.04
FGFR2-204ENST00000356226 SUPT16HQ9Y5B9 1047 aaKnown RBP27.81■■■□□ 2.04
FGFR2-204ENST00000356226 CUX2O14529 1486 aa27.8■■■□□ 2.04
FGFR2-204ENST00000356226 FKBP8Q14318 412 aa27.8■■■□□ 2.04
FGFR2-204ENST00000356226 CHIC2Q9UKJ5 165 aa27.8■■■□□ 2.04
FGFR2-204ENST00000356226 RAB3GAP2Q9H2M9 1393 aa27.76■■■□□ 2.03
FGFR2-204ENST00000356226 NEFLP07196 543 aa27.73■■■□□ 2.03
FGFR2-204ENST00000356226 POLR3GLQ9BT43 218 aa27.73■■■□□ 2.03
FGFR2-204ENST00000356226 CARMIL1Q5VZK9 1371 aa27.69■■■□□ 2.02
FGFR2-204ENST00000356226 IRX6P78412 446 aaPredicted RBP27.65■■■□□ 2.02
FGFR2-204ENST00000356226 SENP3-EIF4A1A0A087X0R7 540 aa27.63■■■□□ 2.01
FGFR2-204ENST00000356226 ANP32CO43423 234 aa27.63■■■□□ 2.01
FGFR2-204ENST00000356226 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
FGFR2-204ENST00000356226 CUX1P39880 1505 aa27.57■■■□□ 2
FGFR2-204ENST00000356226 PRXQ9BXM0 1461 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms