Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM50Q86XT4 RNF165-205ENST00000588679 2904 ntBASIC21.28■■□□□ 1
TRIM50Q86XT4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM50Q86XT4 TREX1-205ENST00000625293 1783 ntBASIC21.28■■□□□ 1
TRIM50Q86XT4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM50Q86XT4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.28■■□□□ 1
TRIM50Q86XT4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.28■■□□□ 1
TRIM50Q86XT4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRIM50Q86XT4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.28■■□□□ 1
TRIM50Q86XT4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.28■■□□□ 1
TRIM50Q86XT4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM50Q86XT4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.28■■□□□ 1
TRIM50Q86XT4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRIM50Q86XT4 AL031133.1-201ENST00000406807 723 ntBASIC21.28■■□□□ 1
TRIM50Q86XT4 AL359075.1-203ENST00000462729 1002 ntBASIC21.28■■□□□ 1
TRIM50Q86XT4 LINC01238-205ENST00000567549 1107 ntBASIC21.28■■□□□ 1
TRIM50Q86XT4 AL358472.4-201ENST00000633140 710 ntBASIC21.28■■□□□ 1
TRIM50Q86XT4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM50Q86XT4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM50Q86XT4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM50Q86XT4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.28■■□□□ 1
TRIM50Q86XT4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM50Q86XT4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.28■■□□□ 1
TRIM50Q86XT4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM50Q86XT4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM50Q86XT4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM50Q86XT4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM50Q86XT4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM50Q86XT4 AC009947.2-201ENST00000444014 672 ntBASIC21.27■■□□□ 1
TRIM50Q86XT4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.27■■□□□ 1
TRIM50Q86XT4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.27■■□□□ 1
TRIM50Q86XT4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.27■■□□□ 1
TRIM50Q86XT4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.27■■□□□ 1
TRIM50Q86XT4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM50Q86XT4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.27■■□□□ 1
TRIM50Q86XT4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.27■■□□□ 1
TRIM50Q86XT4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM50Q86XT4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.27■■□□□ 1
TRIM50Q86XT4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM50Q86XT4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM50Q86XT4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM50Q86XT4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TRIM50Q86XT4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.27■■□□□ 1
TRIM50Q86XT4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
TRIM50Q86XT4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM50Q86XT4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.27■□□□□ 0.99
TRIM50Q86XT4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
TRIM50Q86XT4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM50Q86XT4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM50Q86XT4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 AL512604.3-201ENST00000569583 964 ntBASIC21.26■□□□□ 0.99
TRIM50Q86XT4 AC008622.2-201ENST00000617006 1229 ntBASIC21.26■□□□□ 0.99
TRIM50Q86XT4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRIM50Q86XT4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 KRT18P38-201ENST00000449496 1282 ntBASIC21.25■□□□□ 0.99
TRIM50Q86XT4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM50Q86XT4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms