RNA–Protein interactions for RNA: ENST00000166345.7

TRIP13-201, Transcript of thyroid hormone receptor interactor 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIP13, Length 2,672 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP13-201ENST00000166345 NISCHQ9Y2I1 1504 aa41.01■■■■■ 4.16
TRIP13-201ENST00000166345 SHROOM4Q9ULL8 1493 aa35.85■■■■□ 3.33
TRIP13-201ENST00000166345 SUPT5HO00267 1087 aaKnown RBP35.5■■■■□ 3.27
TRIP13-201ENST00000166345 HRCP23327 699 aa35.19■■■■□ 3.22
TRIP13-201ENST00000166345 MYO15BQ96JP2 1530 aa35.04■■■■□ 3.2
TRIP13-201ENST00000166345 ZCCHC6Q5VYS8 1495 aaKnown RBP34.84■■■■□ 3.17
TRIP13-201ENST00000166345 CHIC1Q5VXU3 224 aa34.84■■■■□ 3.17
TRIP13-201ENST00000166345 PCGF6Q9BYE7 350 aa34.69■■■■□ 3.14
TRIP13-201ENST00000166345 PPARGC1BQ86YN6 1023 aaKnown RBP34.51■■■■□ 3.11
TRIP13-201ENST00000166345 CCDC180Q9P1Z9 1646 aa34.35■■■■□ 3.09
TRIP13-201ENST00000166345 DCAF1Q9Y4B6 1507 aa34.12■■■■□ 3.05
TRIP13-201ENST00000166345 DCAF8L2P0C7V8 631 aa34.01■■■■□ 3.04
TRIP13-201ENST00000166345 LOC105371045A0A1W2PR82 267 aa33.97■■■■□ 3.03
TRIP13-201ENST00000166345 TRIM26Q12899 539 aaPredicted RBP33.69■■■□□ 2.98
TRIP13-201ENST00000166345 ZEB1P37275 1124 aaPredicted RBP33.21■■■□□ 2.91
TRIP13-201ENST00000166345 PELP1Q8IZL8 1130 aaKnown RBP33.11■■■□□ 2.89
TRIP13-201ENST00000166345 ABCC9O60706 1549 aa33.06■■■□□ 2.88
TRIP13-201ENST00000166345 SCAF1Q9H7N4 1312 aaKnown RBP33.04■■■□□ 2.88
TRIP13-201ENST00000166345 TRIM41Q8WV44 630 aa32.89■■■□□ 2.86
TRIP13-201ENST00000166345 RSF1Q96T23 1441 aaPredicted RBP32.84■■■□□ 2.85
TRIP13-201ENST00000166345 FAM9AQ8IZU1 332 aaPredicted RBP32.83■■■□□ 2.85
TRIP13-201ENST00000166345 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.82
TRIP13-201ENST00000166345 EHMT2Q96KQ7 1210 aa32.65■■■□□ 2.82
TRIP13-201ENST00000166345 SCRIBQ14160 1630 aa32.58■■■□□ 2.81
TRIP13-201ENST00000166345 ACIN1Q9UKV3 1341 aaKnown RBP32.34■■■□□ 2.77
TRIP13-201ENST00000166345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.33■■■□□ 2.77
TRIP13-201ENST00000166345 NEUROD1Q13562 356 aa32.31■■■□□ 2.76
TRIP13-201ENST00000166345 CCER1Q8TC90 406 aaPredicted RBP32.21■■■□□ 2.75
TRIP13-201ENST00000166345 CECR2Q9BXF3 1484 aa32.08■■■□□ 2.73
TRIP13-201ENST00000166345 GTF3C3Q9Y5Q9 886 aa32.06■■■□□ 2.72
TRIP13-201ENST00000166345 DIEXFQ68CQ4 756 aaKnown RBP32.05■■■□□ 2.72
TRIP13-201ENST00000166345 MROH2BQ7Z745 1585 aa32.02■■■□□ 2.72
TRIP13-201ENST00000166345 CENPBP07199 599 aaPredicted RBP31.93■■■□□ 2.7
TRIP13-201ENST00000166345 WIZO95785 1651 aa31.92■■■□□ 2.7
TRIP13-201ENST00000166345 TTBK1Q5TCY1 1321 aaPredicted RBP31.8■■■□□ 2.68
TRIP13-201ENST00000166345 EIF4G1Q04637 1599 aaKnown RBP31.78■■■□□ 2.68
TRIP13-201ENST00000166345 WRNQ14191 1432 aaPredicted RBP eCLIP31.7■■■□□ 2.67
TRIP13-201ENST00000166345 BAZ1AQ9NRL2 1556 aaPredicted RBP31.67■■■□□ 2.66
TRIP13-201ENST00000166345 MYT1Q01538 1121 aa31.62■■■□□ 2.65
TRIP13-201ENST00000166345 CEP162Q5TB80 1403 aa31.6■■■□□ 2.65
TRIP13-201ENST00000166345 NACADO15069 1562 aa31.58■■■□□ 2.65
TRIP13-201ENST00000166345 ABCC8Q09428 1581 aa31.56■■■□□ 2.64
TRIP13-201ENST00000166345 CCDC88BA6NC98 1476 aa31.55■■■□□ 2.64
TRIP13-201ENST00000166345 ZNF316A6NFI3 1004 aaPredicted RBP31.54■■■□□ 2.64
TRIP13-201ENST00000166345 YTHDC1Q96MU7 727 aaKnown RBP31.46■■■□□ 2.63
TRIP13-201ENST00000166345 SOGA1O94964 1423 aa31.41■■■□□ 2.62
TRIP13-201ENST00000166345 TNIKQ9UKE5 1360 aa31.41■■■□□ 2.62
TRIP13-201ENST00000166345 MIER1Q8N108 512 aa31.31■■■□□ 2.6
TRIP13-201ENST00000166345 TOP2AP11388 1531 aaKnown RBP31.29■■■□□ 2.6
TRIP13-201ENST00000166345 RUSC2Q8N2Y8 1516 aa31.25■■■□□ 2.59
TRIP13-201ENST00000166345 UBTFP17480 764 aaKnown RBP31.24■■■□□ 2.59
TRIP13-201ENST00000166345 CSRNP3Q8WYN3 585 aa31.21■■■□□ 2.59
TRIP13-201ENST00000166345 SMARCA2P51531 1590 aa31.21■■■□□ 2.59
TRIP13-201ENST00000166345 EEA1Q15075 1411 aa31.14■■■□□ 2.58
TRIP13-201ENST00000166345 HNRNPUL2Q1KMD3 747 aaKnown RBP31.12■■■□□ 2.57
TRIP13-201ENST00000166345 GOLGA3Q08378 1498 aa31.09■■■□□ 2.57
TRIP13-201ENST00000166345 SMARCA4P51532 1647 aa31.08■■■□□ 2.57
TRIP13-201ENST00000166345 CLIP1P30622 1438 aa30.81■■■□□ 2.52
TRIP13-201ENST00000166345 CEP164Q9UPV0 1460 aa30.8■■■□□ 2.52
TRIP13-201ENST00000166345 KIF21BO75037 1637 aa30.76■■■□□ 2.52
TRIP13-201ENST00000166345 VPS8Q8N3P4 1428 aa30.76■■■□□ 2.51
TRIP13-201ENST00000166345 SYNJ1O43426 1573 aa30.68■■■□□ 2.5
TRIP13-201ENST00000166345 UNC13AQ9UPW8 1703 aa30.67■■■□□ 2.5
TRIP13-201ENST00000166345 SUPT16HQ9Y5B9 1047 aaKnown RBP30.65■■■□□ 2.5
TRIP13-201ENST00000166345 APLP2Q06481 763 aa30.63■■■□□ 2.49
TRIP13-201ENST00000166345 PABPN1Q86U42 306 aaKnown RBP eCLIP30.6■■■□□ 2.49
TRIP13-201ENST00000166345 RAPGEF2Q9Y4G8 1499 aa30.58■■■□□ 2.49
TRIP13-201ENST00000166345 RANGAP1P46060 587 aaPredicted RBP30.57■■■□□ 2.48
TRIP13-201ENST00000166345 DHX57Q6P158 1386 aaKnown RBP30.55■■■□□ 2.48
TRIP13-201ENST00000166345 BAZ1BQ9UIG0 1483 aaKnown RBP30.55■■■□□ 2.48
TRIP13-201ENST00000166345 CLSPNQ9HAW4 1339 aa30.54■■■□□ 2.48
TRIP13-201ENST00000166345 TSHZ2Q9NRE2 1034 aa30.39■■■□□ 2.46
TRIP13-201ENST00000166345 PEG3Q9GZU2 1588 aa30.34■■■□□ 2.45
TRIP13-201ENST00000166345 KANK4Q5T7N3 995 aaPredicted RBP30.29■■■□□ 2.44
TRIP13-201ENST00000166345 ARAP1Q96P48 1450 aa30.24■■■□□ 2.43
TRIP13-201ENST00000166345 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
TRIP13-201ENST00000166345 KCNH8Q96L42 1107 aa30.2■■■□□ 2.43
TRIP13-201ENST00000166345 ANP32EQ9BTT0 268 aa30.18■■■□□ 2.42
TRIP13-201ENST00000166345 RRBP1Q9P2E9 1410 aaKnown RBP30.16■■■□□ 2.42
TRIP13-201ENST00000166345 TOP2BQ02880 1626 aa30.14■■■□□ 2.42
TRIP13-201ENST00000166345 CUX2O14529 1486 aa30.1■■■□□ 2.41
TRIP13-201ENST00000166345 ERICH3Q5RHP9 1530 aa30.09■■■□□ 2.41
TRIP13-201ENST00000166345 PRXQ9BXM0 1461 aa30.08■■■□□ 2.41
TRIP13-201ENST00000166345 ATAD2BQ9ULI0 1458 aa30.08■■■□□ 2.41
TRIP13-201ENST00000166345 BCANQ96GW7 911 aa30.04■■■□□ 2.4
TRIP13-201ENST00000166345 CCNB3Q8WWL7 1395 aa30.01■■■□□ 2.39
TRIP13-201ENST00000166345 ITGAEP38570 1179 aa30■■■□□ 2.39
TRIP13-201ENST00000166345 BIVM-ERCC5R4GMW8 1640 aa29.99■■■□□ 2.39
TRIP13-201ENST00000166345 MAPKBP1O60336 1514 aa29.94■■■□□ 2.38
TRIP13-201ENST00000166345 FKBP8Q14318 412 aa29.92■■■□□ 2.38
TRIP13-201ENST00000166345 RAB3GAP2Q9H2M9 1393 aa29.9■■■□□ 2.38
TRIP13-201ENST00000166345 DDX10Q13206 875 aaKnown RBP29.84■■■□□ 2.37
TRIP13-201ENST00000166345 ARHGAP35Q9NRY4 1499 aa29.84■■■□□ 2.37
TRIP13-201ENST00000166345 WDR97A6NE52 1622 aa29.8■■■□□ 2.36
TRIP13-201ENST00000166345 BCL11AQ9H165 835 aa29.79■■■□□ 2.36
TRIP13-201ENST00000166345 CUX1P39880 1505 aa29.73■■■□□ 2.35
TRIP13-201ENST00000166345 SIN3AQ96ST3 1273 aa29.73■■■□□ 2.35
TRIP13-201ENST00000166345 KIF27Q86VH2 1401 aa29.72■■■□□ 2.35
TRIP13-201ENST00000166345 RBM19Q9Y4C8 960 aaKnown RBP29.71■■■□□ 2.35
TRIP13-201ENST00000166345 PPP1R15AO75807 674 aaPredicted RBP29.7■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms