RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 NISCHQ9Y2I1 1504 aa42.27■■■■■ 4.36
EBF1-202ENST00000380654 CCDC180Q9P1Z9 1646 aa36.04■■■■□ 3.36
EBF1-202ENST00000380654 SHROOM4Q9ULL8 1493 aa35.91■■■■□ 3.34
EBF1-202ENST00000380654 ZCCHC6Q5VYS8 1495 aaKnown RBP35.72■■■■□ 3.31
EBF1-202ENST00000380654 SUPT5HO00267 1087 aaKnown RBP35.1■■■■□ 3.21
EBF1-202ENST00000380654 DCAF8L2P0C7V8 631 aa35.09■■■■□ 3.21
EBF1-202ENST00000380654 DCAF1Q9Y4B6 1507 aa34.66■■■■□ 3.14
EBF1-202ENST00000380654 CHIC1Q5VXU3 224 aa34.03■■■■□ 3.04
EBF1-202ENST00000380654 MYO15BQ96JP2 1530 aa33.91■■■■□ 3.02
EBF1-202ENST00000380654 SCRIBQ14160 1630 aa33.78■■■■□ 3
EBF1-202ENST00000380654 ABCC9O60706 1549 aa33.69■■■□□ 2.98
EBF1-202ENST00000380654 RSF1Q96T23 1441 aaPredicted RBP33.37■■■□□ 2.93
EBF1-202ENST00000380654 NACADO15069 1562 aa33.34■■■□□ 2.93
EBF1-202ENST00000380654 RB1CC1Q8TDY2 1594 aa33.04■■■□□ 2.88
EBF1-202ENST00000380654 LOC105371045A0A1W2PR82 267 aa33.04■■■□□ 2.88
EBF1-202ENST00000380654 CECR2Q9BXF3 1484 aa33.02■■■□□ 2.88
EBF1-202ENST00000380654 MROH2BQ7Z745 1585 aa32.88■■■□□ 2.85
EBF1-202ENST00000380654 PCGF6Q9BYE7 350 aa32.77■■■□□ 2.84
EBF1-202ENST00000380654 WIZO95785 1651 aa32.72■■■□□ 2.83
EBF1-202ENST00000380654 TRIM41Q8WV44 630 aa32.68■■■□□ 2.82
EBF1-202ENST00000380654 HRCP23327 699 aa32.61■■■□□ 2.81
EBF1-202ENST00000380654 BAZ1AQ9NRL2 1556 aaPredicted RBP32.47■■■□□ 2.79
EBF1-202ENST00000380654 UNC13AQ9UPW8 1703 aa32.47■■■□□ 2.79
EBF1-202ENST00000380654 FAM9AQ8IZU1 332 aaPredicted RBP32.45■■■□□ 2.78
EBF1-202ENST00000380654 SMARCA4P51532 1647 aa32.26■■■□□ 2.75
EBF1-202ENST00000380654 EHMT2Q96KQ7 1210 aa32.2■■■□□ 2.74
EBF1-202ENST00000380654 EIF4G1Q04637 1599 aaKnown RBP32.19■■■□□ 2.74
EBF1-202ENST00000380654 TRIM26Q12899 539 aaPredicted RBP32.16■■■□□ 2.74
EBF1-202ENST00000380654 TOP2AP11388 1531 aaKnown RBP32.15■■■□□ 2.74
EBF1-202ENST00000380654 PABPN1Q86U42 306 aaKnown RBP eCLIP32.05■■■□□ 2.72
EBF1-202ENST00000380654 PPARGC1BQ86YN6 1023 aaKnown RBP32.03■■■□□ 2.72
EBF1-202ENST00000380654 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
EBF1-202ENST00000380654 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
EBF1-202ENST00000380654 SMARCA2P51531 1590 aa32■■■□□ 2.71
EBF1-202ENST00000380654 ABCC8Q09428 1581 aa31.91■■■□□ 2.7
EBF1-202ENST00000380654 PEG3Q9GZU2 1588 aa31.63■■■□□ 2.65
EBF1-202ENST00000380654 SOGA1O94964 1423 aa31.55■■■□□ 2.64
EBF1-202ENST00000380654 ATAD2BQ9ULI0 1458 aa31.45■■■□□ 2.63
EBF1-202ENST00000380654 RUSC2Q8N2Y8 1516 aa31.42■■■□□ 2.62
EBF1-202ENST00000380654 BAZ1BQ9UIG0 1483 aaKnown RBP31.36■■■□□ 2.61
EBF1-202ENST00000380654 WRNQ14191 1432 aaPredicted RBP eCLIP31.34■■■□□ 2.61
EBF1-202ENST00000380654 CSRNP3Q8WYN3 585 aa31.3■■■□□ 2.6
EBF1-202ENST00000380654 ZEB1P37275 1124 aaPredicted RBP31.3■■■□□ 2.6
EBF1-202ENST00000380654 CEP162Q5TB80 1403 aa31.29■■■□□ 2.6
EBF1-202ENST00000380654 EEA1Q15075 1411 aa31.28■■■□□ 2.6
EBF1-202ENST00000380654 SYNJ1O43426 1573 aa31.25■■■□□ 2.59
EBF1-202ENST00000380654 TNIKQ9UKE5 1360 aa31.23■■■□□ 2.59
EBF1-202ENST00000380654 UBTFP17480 764 aaKnown RBP31.16■■■□□ 2.58
EBF1-202ENST00000380654 TTBK1Q5TCY1 1321 aaPredicted RBP31.11■■■□□ 2.57
EBF1-202ENST00000380654 GOLGA3Q08378 1498 aa31.1■■■□□ 2.57
EBF1-202ENST00000380654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.97■■■□□ 2.55
EBF1-202ENST00000380654 CEP164Q9UPV0 1460 aa30.94■■■□□ 2.54
EBF1-202ENST00000380654 KIF21BO75037 1637 aa30.92■■■□□ 2.54
EBF1-202ENST00000380654 TOP2BQ02880 1626 aa30.86■■■□□ 2.53
EBF1-202ENST00000380654 NCAPD3P42695 1498 aa30.85■■■□□ 2.53
EBF1-202ENST00000380654 HMGXB3Q12766 1538 aa30.85■■■□□ 2.53
EBF1-202ENST00000380654 CCER1Q8TC90 406 aaPredicted RBP30.84■■■□□ 2.53
EBF1-202ENST00000380654 RAPGEF2Q9Y4G8 1499 aa30.79■■■□□ 2.52
EBF1-202ENST00000380654 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.52
EBF1-202ENST00000380654 CLIP1P30622 1438 aa30.74■■■□□ 2.51
EBF1-202ENST00000380654 RANGAP1P46060 587 aaPredicted RBP30.64■■■□□ 2.5
EBF1-202ENST00000380654 CUX1P39880 1505 aa30.62■■■□□ 2.49
EBF1-202ENST00000380654 VPS8Q8N3P4 1428 aa30.58■■■□□ 2.49
EBF1-202ENST00000380654 CFTRP13569 1480 aa30.57■■■□□ 2.48
EBF1-202ENST00000380654 PRXQ9BXM0 1461 aa30.49■■■□□ 2.47
EBF1-202ENST00000380654 ERICH3Q5RHP9 1530 aa30.45■■■□□ 2.46
EBF1-202ENST00000380654 APLP2Q06481 763 aa30.38■■■□□ 2.45
EBF1-202ENST00000380654 KIF27Q86VH2 1401 aa30.38■■■□□ 2.45
EBF1-202ENST00000380654 HNRNPUL2Q1KMD3 747 aaKnown RBP30.38■■■□□ 2.45
EBF1-202ENST00000380654 PRDM2Q13029 1718 aa30.37■■■□□ 2.45
EBF1-202ENST00000380654 ARAP1Q96P48 1450 aa30.3■■■□□ 2.44
EBF1-202ENST00000380654 CADPSQ9ULU8 1353 aa30.25■■■□□ 2.43
EBF1-202ENST00000380654 CC2D2AQ9P2K1 1620 aa30.24■■■□□ 2.43
EBF1-202ENST00000380654 CUX2O14529 1486 aa30.16■■■□□ 2.42
EBF1-202ENST00000380654 KANK4Q5T7N3 995 aaPredicted RBP30.11■■■□□ 2.41
EBF1-202ENST00000380654 DIEXFQ68CQ4 756 aaKnown RBP30.11■■■□□ 2.41
EBF1-202ENST00000380654 FGD5Q6ZNL6 1462 aa30.1■■■□□ 2.41
EBF1-202ENST00000380654 IGF1RP08069 1367 aa30.08■■■□□ 2.41
EBF1-202ENST00000380654 ARHGAP35Q9NRY4 1499 aa30.07■■■□□ 2.4
EBF1-202ENST00000380654 FANCD2Q9BXW9 1451 aa29.98■■■□□ 2.39
EBF1-202ENST00000380654 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.38
EBF1-202ENST00000380654 ZNF316A6NFI3 1004 aaPredicted RBP29.94■■■□□ 2.38
EBF1-202ENST00000380654 SCAF1Q9H7N4 1312 aaKnown RBP29.93■■■□□ 2.38
EBF1-202ENST00000380654 NESP48681 1621 aa29.88■■■□□ 2.37
EBF1-202ENST00000380654 RRBP1Q9P2E9 1410 aaKnown RBP29.83■■■□□ 2.37
EBF1-202ENST00000380654 RAD54L2Q9Y4B4 1467 aa29.83■■■□□ 2.37
EBF1-202ENST00000380654 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
EBF1-202ENST00000380654 TOPBP1Q92547 1522 aa29.78■■■□□ 2.36
EBF1-202ENST00000380654 POLA1P09884 1462 aaPredicted RBP29.76■■■□□ 2.36
EBF1-202ENST00000380654 DHX57Q6P158 1386 aaKnown RBP29.75■■■□□ 2.35
EBF1-202ENST00000380654 CCNB3Q8WWL7 1395 aa29.72■■■□□ 2.35
EBF1-202ENST00000380654 NEUROD1Q13562 356 aa29.72■■■□□ 2.35
EBF1-202ENST00000380654 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
EBF1-202ENST00000380654 TIAM1Q13009 1591 aa29.7■■■□□ 2.35
EBF1-202ENST00000380654 ACIN1Q9UKV3 1341 aaKnown RBP29.7■■■□□ 2.34
EBF1-202ENST00000380654 P3H3Q8IVL6 736 aa29.68■■■□□ 2.34
EBF1-202ENST00000380654 ITGAEP38570 1179 aa29.66■■■□□ 2.34
EBF1-202ENST00000380654 CLSPNQ9HAW4 1339 aa29.61■■■□□ 2.33
EBF1-202ENST00000380654 MAP3K1Q13233 1512 aa29.61■■■□□ 2.33
EBF1-202ENST00000380654 URB2Q14146 1524 aaKnown RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms