Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.39■□□□□ 0.37
CXCR4P61073 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.39■□□□□ 0.37
CXCR4P61073 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CXCR4P61073 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.39■□□□□ 0.37
CXCR4P61073 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.39■□□□□ 0.37
CXCR4P61073 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 AL589743.5-201ENST00000616611 1050 ntBASIC17.39■□□□□ 0.37
CXCR4P61073 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.39■□□□□ 0.37
CXCR4P61073 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CXCR4P61073 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCR4P61073 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 SDHAP1-207ENST00000440850 2000 ntBASIC17.38■□□□□ 0.37
CXCR4P61073 FZD10-202ENST00000539839 3282 ntBASIC17.38■□□□□ 0.37
CXCR4P61073 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CXCR4P61073 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CXCR4P61073 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.38■□□□□ 0.37
CXCR4P61073 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.38■□□□□ 0.37
CXCR4P61073 C2orf69P4-201ENST00000565394 541 ntBASIC17.38■□□□□ 0.37
CXCR4P61073 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.38■□□□□ 0.37
CXCR4P61073 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.38■□□□□ 0.37
CXCR4P61073 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.38■□□□□ 0.37
CXCR4P61073 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.38■□□□□ 0.37
CXCR4P61073 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.38■□□□□ 0.37
CXCR4P61073 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCR4P61073 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.38■□□□□ 0.37
CXCR4P61073 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CXCR4P61073 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.37■□□□□ 0.37
CXCR4P61073 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.37■□□□□ 0.37
CXCR4P61073 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CXCR4P61073 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.37■□□□□ 0.37
CXCR4P61073 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.37■□□□□ 0.37
CXCR4P61073 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.37■□□□□ 0.37
CXCR4P61073 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CXCR4P61073 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 AC010980.2-201ENST00000587099 1412 ntBASIC17.37■□□□□ 0.37
CXCR4P61073 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CXCR4P61073 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCR4P61073 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.37■□□□□ 0.37
CXCR4P61073 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 TFP1-202ENST00000475455 1573 ntBASIC17.36■□□□□ 0.37
CXCR4P61073 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CXCR4P61073 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CXCR4P61073 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.36■□□□□ 0.37
CXCR4P61073 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CXCR4P61073 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.36■□□□□ 0.37
CXCR4P61073 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.36■□□□□ 0.37
CXCR4P61073 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.36■□□□□ 0.37
CXCR4P61073 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CXCR4P61073 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.36■□□□□ 0.37
CXCR4P61073 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCR4P61073 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms