Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.052e-18■■□□□ 13.2
NCBP2P52298 SLC4A2-206ENST00000466368 548 ntTSL 413.79□□□□□ -0.22e-18■■□□□ 13.2
NCBP2P52298 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.919e-11■■□□□ 13.2
NCBP2P52298 STK25-215ENST00000439101 779 ntTSL 524.23■■□□□ 1.479e-11■■□□□ 13.2
NCBP2P52298 STK25-209ENST00000424537 781 ntTSL 223.83■■□□□ 1.419e-11■■□□□ 13.2
NCBP2P52298 STK25-213ENST00000436402 600 ntTSL 518.88■□□□□ 0.619e-11■■□□□ 13.2
NCBP2P52298 CTDSP1-213ENST00000496785 460 ntTSL 517.81■□□□□ 0.442e-7■■□□□ 13.2
NCBP2P52298 CTDSP1-203ENST00000431127 586 ntTSL 316.05■□□□□ 0.162e-7■■□□□ 13.2
NCBP2P52298 CTDSP1-202ENST00000428361 842 ntTSL 514.07□□□□□ -0.162e-7■■□□□ 13.2
NCBP2P52298 EEF1D-240ENST00000531770 589 ntTSL 413.16□□□□□ -0.36e-7■■□□□ 13.2
NCBP2P52298 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.572e-7■■□□□ 13.1
NCBP2P52298 RBM14-RBM4-202ENST00000421355 2034 ntTSL 217.91■□□□□ 0.462e-7■■□□□ 13.1
NCBP2P52298 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.8■□□□□ 0.282e-7■■□□□ 13.1
NCBP2P52298 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.93■□□□□ 0.142e-7■■□□□ 13.1
NCBP2P52298 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.112e-7■■□□□ 13.1
NCBP2P52298 RBM14-RBM4-204ENST00000511114 523 ntTSL 411.36□□□□□ -0.592e-7■■□□□ 13.1
NCBP2P52298 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)21.25■□□□□ 0.994e-18■■□□□ 13.1
NCBP2P52298 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.244e-18■■□□□ 13.1
NCBP2P52298 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.042e-8■■□□□ 13.1
NCBP2P52298 AKAP1-216ENST00000575322 650 ntTSL 46.07□□□□□ -1.442e-8■■□□□ 13.1
NCBP2P52298 TMEM259-210ENST00000592618 1877 ntTSL 523.28■■□□□ 1.322e-8■■□□□ 13.1
NCBP2P52298 C8orf44-203ENST00000519561 1835 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.642e-9■■□□□ 13.1
NCBP2P52298 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.052e-9■■□□□ 13.1
NCBP2P52298 C8orf44-204ENST00000521113 575 ntTSL 28.44□□□□□ -1.062e-9■■□□□ 13.1
NCBP2P52298 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.392e-9■■□□□ 13.1
NCBP2P52298 C8orf44-SGK3-202ENST00000520044 628 ntTSL 35.09□□□□□ -1.592e-9■■□□□ 13.1
NCBP2P52298 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.24e-12■■□□□ 13.1
NCBP2P52298 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.155e-10■■□□□ 13.1
NCBP2P52298 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.142e-6■■□□□ 13.1
NCBP2P52298 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC10.84□□□□□ -0.672e-6■■□□□ 13.1
NCBP2P52298 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.93e-7■■□□□ 13.1
NCBP2P52298 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.79■□□□□ 0.763e-7■■□□□ 13.1
NCBP2P52298 LSM14A-207ENST00000589878 559 ntTSL 416.3■□□□□ 0.23e-7■■□□□ 13.1
NCBP2P52298 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.33e-7■■□□□ 13.1
NCBP2P52298 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.323e-7■■□□□ 13.1
NCBP2P52298 ASH2L-204ENST00000517719 656 ntTSL 317.25■□□□□ 0.353e-7■■□□□ 13.1
NCBP2P52298 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.54□□□□□ -0.083e-7■■□□□ 13.1
NCBP2P52298 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.253e-7■■□□□ 13.1
NCBP2P52298 ASH2L-203ENST00000517496 2194 ntTSL 212.57□□□□□ -0.43e-7■■□□□ 13.1
NCBP2P52298 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.59■■□□□ 1.052e-8■■□□□ 13.1
NCBP2P52298 TGFBR1-207ENST00000549766 1678 ntTSL 523.19■■□□□ 1.31e-8■■□□□ 13.1
NCBP2P52298 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.891e-8■■□□□ 13.1
NCBP2P52298 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.98■□□□□ 0.631e-8■■□□□ 13.1
NCBP2P52298 TGFBR1-209ENST00000552516 5933 ntTSL 1 (best) BASIC10.45□□□□□ -0.741e-8■■□□□ 13.1
NCBP2P52298 TGFBR1-204ENST00000547314 533 ntTSL 43.3□□□□□ -1.881e-8■■□□□ 13.1
NCBP2P52298 TGFBR1-210ENST00000552573 526 ntTSL 40.84□□□□□ -2.271e-8■■□□□ 13.1
NCBP2P52298 NUMB-219ENST00000555987 557 ntTSL 418.87■□□□□ 0.613e-6■■□□□ 13.1
NCBP2P52298 NUMB-221ENST00000556600 751 ntTSL 318.87■□□□□ 0.613e-6■■□□□ 13.1
NCBP2P52298 NUMB-213ENST00000554818 552 ntTSL 314.05□□□□□ -0.163e-6■■□□□ 13.1
NCBP2P52298 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.223e-6■■□□□ 13.1
NCBP2P52298 NUMB-215ENST00000555307 1039 ntTSL 512.87□□□□□ -0.353e-6■■□□□ 13.1
NCBP2P52298 NUMB-209ENST00000554315 1740 ntTSL 1 (best)12.74□□□□□ -0.373e-6■■□□□ 13.1
NCBP2P52298 NUMB-225ENST00000557031 567 ntTSL 411.75□□□□□ -0.533e-6■■□□□ 13.1
NCBP2P52298 NUMB-230ENST00000557774 847 ntTSL 211.63□□□□□ -0.553e-6■■□□□ 13.1
NCBP2P52298 NUMB-222ENST00000556700 529 ntTSL 410.54□□□□□ -0.723e-6■■□□□ 13.1
NCBP2P52298 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.83e-6■■□□□ 13.1
NCBP2P52298 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.823e-6■■□□□ 13.1
NCBP2P52298 NUMB-206ENST00000553415 694 ntTSL 49.45□□□□□ -0.93e-6■■□□□ 13.1
NCBP2P52298 NUMB-210ENST00000554394 954 ntTSL 37.9□□□□□ -1.143e-6■■□□□ 13.1
NCBP2P52298 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.253e-6■■□□□ 13.1
NCBP2P52298 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.413e-6■■□□□ 13.1
NCBP2P52298 NUMB-218ENST00000555859 906 ntTSL 25.51□□□□□ -1.533e-6■■□□□ 13.1
NCBP2P52298 NUMB-220ENST00000556112 568 ntTSL 43.94□□□□□ -1.783e-6■■□□□ 13.1
NCBP2P52298 EHBP1-204ENST00000405482 1311 ntTSL 220.68■□□□□ 0.93e-11■■□□□ 13.1
NCBP2P52298 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.56■□□□□ 0.723e-9■■□□□ 13.1
NCBP2P52298 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.653e-11■■□□□ 13.1
NCBP2P52298 EHBP1-205ENST00000413434 533 ntTSL 49.24□□□□□ -0.933e-11■■□□□ 13.1
NCBP2P52298 EHBP1-217ENST00000472809 1374 ntTSL 58.68□□□□□ -1.023e-11■■□□□ 13.1
NCBP2P52298 EHBP1-211ENST00000449820 539 ntTSL 58.35□□□□□ -1.073e-11■■□□□ 13.1
NCBP2P52298 EHBP1-207ENST00000426940 586 ntTSL 46.94□□□□□ -1.33e-11■■□□□ 13.1
NCBP2P52298 EHBP1-208ENST00000427809 581 ntTSL 45.23□□□□□ -1.573e-11■■□□□ 13.1
NCBP2P52298 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.713e-11■■□□□ 13.1
NCBP2P52298 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)3.83□□□□□ -1.83e-11■■□□□ 13.1
NCBP2P52298 CHD4-214ENST00000545942 1317 ntTSL 1 (best)20.69■□□□□ 0.94e-7■■□□□ 13.1
NCBP2P52298 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.024e-7■■□□□ 13.1
NCBP2P52298 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.094e-7■■□□□ 13.1
NCBP2P52298 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.55□□□□□ -0.44e-7■■□□□ 13.1
NCBP2P52298 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.471e-12■■□□□ 13.1
NCBP2P52298 ELOVL6-205ENST00000506625 610 ntTSL 49.3□□□□□ -0.921e-12■■□□□ 13.1
NCBP2P52298 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.511e-12■■□□□ 13.1
NCBP2P52298 ELOVL6-203ENST00000503885 458 ntTSL 44.24□□□□□ -1.731e-12■■□□□ 13.1
NCBP2P52298 ELOVL6-208ENST00000514184 607 ntTSL 32.4□□□□□ -2.031e-12■■□□□ 13.1
NCBP2P52298 CSE1L-201ENST00000262982 3553 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.679e-11■■□□□ 13.1
NCBP2P52298 CSE1L-202ENST00000396192 3459 ntTSL 5 BASIC10.49□□□□□ -0.739e-11■■□□□ 13.1
NCBP2P52298 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.03■□□□□ 0.165e-15■■□□□ 13.1
NCBP2P52298 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.045e-15■■□□□ 13.1
NCBP2P52298 PICALM-210ENST00000528411 586 ntTSL 513.76□□□□□ -0.215e-15■■□□□ 13.1
NCBP2P52298 PICALM-203ENST00000525162 548 ntTSL 47.08□□□□□ -1.285e-15■■□□□ 13.1
NCBP2P52298 PICALM-208ENST00000528256 563 ntTSL 44.7□□□□□ -1.665e-15■■□□□ 13.1
NCBP2P52298 PICALM-217ENST00000531930 703 ntTSL 53.19□□□□□ -1.95e-15■■□□□ 13.1
NCBP2P52298 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.98□□□□□ -2.095e-15■■□□□ 13.1
NCBP2P52298 TMC6-209ENST00000588087 2384 ntTSL 220.36■□□□□ 0.855e-8■■□□□ 13
NCBP2P52298 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.81■□□□□ 0.765e-8■■□□□ 13
NCBP2P52298 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.56■□□□□ 0.565e-8■■□□□ 13
NCBP2P52298 TMC6-210ENST00000588792 843 ntTSL 216.88■□□□□ 0.295e-8■■□□□ 13
NCBP2P52298 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.265e-8■■□□□ 13
NCBP2P52298 TMC6-211ENST00000589271 1099 ntTSL 516.1■□□□□ 0.175e-8■■□□□ 13
NCBP2P52298 TMC6-224ENST00000593044 3070 ntTSL 215.2■□□□□ 0.025e-8■■□□□ 13
NCBP2P52298 TMC6-205ENST00000586126 821 ntTSL 315.15■□□□□ 0.025e-8■■□□□ 13
NCBP2P52298 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 05e-8■■□□□ 13
Retrieved 100 of 18,329 protein–RNA pairs in 108 ms