RNA–Protein interactions for RNA: ENST00000557774.5

NUMB-230, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 847 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-230ENST00000557774 AEBP2Q6ZN18 517 aaPredicted RBP41.16■■■■■ 4.18
NUMB-230ENST00000557774 CHIC1Q5VXU3 224 aa38.38■■■■□ 3.73
NUMB-230ENST00000557774 SENP3Q9H4L4 574 aaPredicted RBP35.18■■■■□ 3.22
NUMB-230ENST00000557774 PHF23Q9BUL5 403 aaPredicted RBP34.65■■■■□ 3.14
NUMB-230ENST00000557774 FOXD1Q16676 465 aa32.96■■■□□ 2.87
NUMB-230ENST00000557774 POTEDQ86YR6 584 aa32.02■■■□□ 2.72
NUMB-230ENST00000557774 NISCHQ9Y2I1 1504 aa31.85■■■□□ 2.69
NUMB-230ENST00000557774 MSH5O43196 834 aa31.14■■■□□ 2.58
NUMB-230ENST00000557774 PIAS4Q8N2W9 510 aaPredicted RBP30.55■■■□□ 2.48
NUMB-230ENST00000557774 PPP6R1Q9UPN7 881 aa30.14■■■□□ 2.42
NUMB-230ENST00000557774 PLPPR3Q6T4P5 718 aa30.03■■■□□ 2.4
NUMB-230ENST00000557774 ADRA2BP18089 450 aa29.98■■■□□ 2.39
NUMB-230ENST00000557774 ABCC9O60706 1549 aa28.49■■■□□ 2.15
NUMB-230ENST00000557774 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
NUMB-230ENST00000557774 MAPK8IP2Q13387 824 aaPredicted RBP27.84■■■□□ 2.05
NUMB-230ENST00000557774 DMRT2Q9Y5R5 561 aa27.77■■■□□ 2.04
NUMB-230ENST00000557774 SCAF1Q9H7N4 1312 aaKnown RBP27.36■■□□□ 1.97
NUMB-230ENST00000557774 CACNB1Q02641 598 aaPredicted RBP27.33■■□□□ 1.97
NUMB-230ENST00000557774 RB1CC1Q8TDY2 1594 aa27.15■■□□□ 1.94
NUMB-230ENST00000557774 DCAF8L2P0C7V8 631 aa27.02■■□□□ 1.92
NUMB-230ENST00000557774 NACADO15069 1562 aa27■■□□□ 1.91
NUMB-230ENST00000557774 DNAJC5BQ9UF47 199 aa26.73■■□□□ 1.87
NUMB-230ENST00000557774 DCAF8L1A6NGE4 600 aa26.71■■□□□ 1.87
NUMB-230ENST00000557774 MYO15BQ96JP2 1530 aa26.67■■□□□ 1.86
NUMB-230ENST00000557774 PABPN1Q86U42 306 aaKnown RBP eCLIP26.62■■□□□ 1.85
NUMB-230ENST00000557774 RNF39Q9H2S5 420 aa26.52■■□□□ 1.84
NUMB-230ENST00000557774 HOXD11P31277 338 aaPredicted RBP26.38■■□□□ 1.81
NUMB-230ENST00000557774 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
NUMB-230ENST00000557774 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
NUMB-230ENST00000557774 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
NUMB-230ENST00000557774 BICRAQ9NZM4 1560 aa26.28■■□□□ 1.8
NUMB-230ENST00000557774 PPP4R3CPQ6ZMV5 832 aa26.24■■□□□ 1.79
NUMB-230ENST00000557774 SHROOM4Q9ULL8 1493 aa26.05■■□□□ 1.76
NUMB-230ENST00000557774 C1QBPQ07021 282 aaKnown RBP26.05■■□□□ 1.76
NUMB-230ENST00000557774 SCRIBQ14160 1630 aa25.95■■□□□ 1.74
NUMB-230ENST00000557774 CNKSR2Q8WXI2 1034 aa25.93■■□□□ 1.74
NUMB-230ENST00000557774 RNF216Q9NWF9 866 aaPredicted RBP25.93■■□□□ 1.74
NUMB-230ENST00000557774 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
NUMB-230ENST00000557774 CC2D2AQ9P2K1 1620 aa25.69■■□□□ 1.7
NUMB-230ENST00000557774 EIF4G1Q04637 1599 aaKnown RBP25.67■■□□□ 1.7
NUMB-230ENST00000557774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.15■■□□□ 1.62
NUMB-230ENST00000557774 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
NUMB-230ENST00000557774 NCBP3Q53F19 620 aaKnown RBP24.9■■□□□ 1.58
NUMB-230ENST00000557774 POTEHQ6S545 545 aa24.9■■□□□ 1.58
NUMB-230ENST00000557774 ATAD2BQ9ULI0 1458 aa24.87■■□□□ 1.57
NUMB-230ENST00000557774 SMARCA2P51531 1590 aa24.8■■□□□ 1.56
NUMB-230ENST00000557774 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
NUMB-230ENST00000557774 BAZ1AQ9NRL2 1556 aaPredicted RBP24.73■■□□□ 1.55
NUMB-230ENST00000557774 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
NUMB-230ENST00000557774 ERCC6Q03468 1493 aa24.65■■□□□ 1.54
NUMB-230ENST00000557774 BAZ1BQ9UIG0 1483 aaKnown RBP24.63■■□□□ 1.53
NUMB-230ENST00000557774 NPM3O75607 178 aaKnown RBP24.59■■□□□ 1.53
NUMB-230ENST00000557774 DNAJC5Q9H3Z4 198 aa24.58■■□□□ 1.53
NUMB-230ENST00000557774 CUX2O14529 1486 aa24.58■■□□□ 1.52
NUMB-230ENST00000557774 PEG3Q9GZU2 1588 aa24.56■■□□□ 1.52
NUMB-230ENST00000557774 DSG3P32926 999 aa24.53■■□□□ 1.52
NUMB-230ENST00000557774 U3KPZ7 1027 aaPredicted RBP24.53■■□□□ 1.52
NUMB-230ENST00000557774 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
NUMB-230ENST00000557774 SPINK5Q9NQ38 1064 aaPredicted RBP24.48■■□□□ 1.51
NUMB-230ENST00000557774 NESP48681 1621 aa24.46■■□□□ 1.51
NUMB-230ENST00000557774 CAPN15O75808 1086 aa24.45■■□□□ 1.5
NUMB-230ENST00000557774 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
NUMB-230ENST00000557774 PDS5BQ9NTI5 1447 aa24.3■■□□□ 1.48
NUMB-230ENST00000557774 CADPSQ9ULU8 1353 aa24.24■■□□□ 1.47
NUMB-230ENST00000557774 WIZO95785 1651 aa24.17■■□□□ 1.46
NUMB-230ENST00000557774 THOC2Q8NI27 1593 aaKnown RBP24.13■■□□□ 1.45
NUMB-230ENST00000557774 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
NUMB-230ENST00000557774 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
NUMB-230ENST00000557774 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
NUMB-230ENST00000557774 CFTRP13569 1480 aa23.93■■□□□ 1.42
NUMB-230ENST00000557774 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
NUMB-230ENST00000557774 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
NUMB-230ENST00000557774 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
NUMB-230ENST00000557774 WDR62O43379 1518 aa23.89■■□□□ 1.41
NUMB-230ENST00000557774 TRHP20396 242 aaPredicted RBP23.85■■□□□ 1.41
NUMB-230ENST00000557774 ABCB7O75027 752 aa23.83■■□□□ 1.41
NUMB-230ENST00000557774 SLC4A2P04920 1241 aa23.75■■□□□ 1.39
NUMB-230ENST00000557774 ZNF219Q9P2Y4 722 aaPredicted RBP23.71■■□□□ 1.39
NUMB-230ENST00000557774 CCDC88BA6NC98 1476 aa23.7■■□□□ 1.38
NUMB-230ENST00000557774 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
NUMB-230ENST00000557774 APLP2Q06481 763 aa23.65■■□□□ 1.38
NUMB-230ENST00000557774 OSCARQ8IYS5 282 aa23.59■■□□□ 1.37
NUMB-230ENST00000557774 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
NUMB-230ENST00000557774 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
NUMB-230ENST00000557774 PRDM2Q13029 1718 aa23.48■■□□□ 1.35
NUMB-230ENST00000557774 IFT140Q96RY7 1462 aa23.47■■□□□ 1.35
NUMB-230ENST00000557774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
NUMB-230ENST00000557774 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
NUMB-230ENST00000557774 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
NUMB-230ENST00000557774 RBM42Q9BTD8 480 aaKnown RBP23.37■■□□□ 1.33
NUMB-230ENST00000557774 ZNF608Q9ULD9 1512 aaPredicted RBP23.36■■□□□ 1.33
NUMB-230ENST00000557774 DNMBPQ6XZF7 1577 aa23.33■■□□□ 1.33
NUMB-230ENST00000557774 KCNA4P22459 653 aa23.32■■□□□ 1.32
NUMB-230ENST00000557774 SAMD1Q6SPF0 538 aaPredicted RBP23.28■■□□□ 1.32
NUMB-230ENST00000557774 CHRDL2Q6WN34 429 aa23.27■■□□□ 1.32
NUMB-230ENST00000557774 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.3
NUMB-230ENST00000557774 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
NUMB-230ENST00000557774 SOGA1O94964 1423 aa23.18■■□□□ 1.3
NUMB-230ENST00000557774 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
NUMB-230ENST00000557774 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms